Difference between revisions of "SAM-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] == * direction: ** REVER...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=SAM-PWY SAM-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=SAM-PWY SAM-PWY] ==
−
* direction:
+
* taxonomic range:
−
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** ketopantoate_hydroxymethyltransferase
+
** S-adenosyl-L-methionine biosynthesis
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.1.2.11 EC-2.1.2.11]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** S-adenosylmethionine biosynthesis
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''1''' reactions in the full pathway
−
** 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[2-DEHYDROPANTOATE]][c]
+
* [[S-ADENMETSYN-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 3-methyl-2-oxobutanoate[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 H2O[c] '''<=>''' 1 a tetrahydrofolate[c] '''+''' 1 2-dehydropantoate[c]
+
*** [[Tiso_gene_13443]]
−
 
+
** 6 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-experimental_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-esiliculosus]]
−
* [[Tiso_gene_14466]]
+
*** [[orthology-athaliana]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-synechocystis]]
−
***AUTOMATED-NAME-MATCH
+
*** [[manual-primary_network]]
−
* [[Tiso_gene_14465]]
+
*** [[orthology-creinhardtii]]
−
** IN-SILICO_ANNOTATION
+
== Reaction(s) not found ==
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ECOCYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11824 11824]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=SAM-PWY SAM-PWY]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-33090}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01226 R01226]
+
{{#set: taxonomic range=TAX-4751}}
−
* UNIPROT:
+
{{#set: taxonomic range=TAX-2157}}
−
** [http://www.uniprot.org/uniprot/Q9V0E1 Q9V0E1]
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.uniprot.org/uniprot/Q9JUY0 Q9JUY0]
+
{{#set: common name=S-adenosyl-L-methionine biosynthesis}}
−
** [http://www.uniprot.org/uniprot/P31057 P31057]
+
{{#set: common name=S-adenosylmethionine biosynthesis}}
−
** [http://www.uniprot.org/uniprot/Q9PIK1 Q9PIK1]
+
{{#set: reaction found=1}}
−
** [http://www.uniprot.org/uniprot/P38122 P38122]
+
{{#set: total reaction=1}}
−
** [http://www.uniprot.org/uniprot/Q09672 Q09672]
+
{{#set: completion rate=100.0}}
−
** [http://www.uniprot.org/uniprot/P52997 P52997]
+
−
** [http://www.uniprot.org/uniprot/Q9X712 Q9X712]
+
−
** [http://www.uniprot.org/uniprot/Q9Y7B6 Q9Y7B6]
+
−
** [http://www.uniprot.org/uniprot/Q9L7B2 Q9L7B2]
+
−
** [http://www.uniprot.org/uniprot/Q9RKS2 Q9RKS2]
+
−
** [http://www.uniprot.org/uniprot/Q9RLE2 Q9RLE2]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=ketopantoate_hydroxymethyltransferase}}
+
−
{{#set: ec number=EC-2.1.2.11}}
+
−
{{#set: gene associated=Tiso_gene_14466|Tiso_gene_14465}}
+
−
{{#set: in pathway=PANTO-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:16, 21 March 2018

Pathway SAM-PWY

Reaction(s) found

1 reactions found over 1 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SAM-PWY&oldid=40560"