Difference between revisions of "PWY-842"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] == * direction: ** REVERSIBLE * common nam...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-842 PWY-842] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4479 TAX-4479...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-842 PWY-842] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4479 TAX-4479]
 
* common name:
 
* common name:
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** Methylacrylyl-CoA hydratase
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** starch degradation I
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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* Synonym(s):
 
* Synonym(s):
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** starch mobilization from cereal endosperm
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** starch degradation from cereal endosperm
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''3''' reactions in the full pathway
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** 1 [[CPD-12173]][c] '''<=>''' 1 [[METHACRYLYL-COA]][c] '''+''' 1 [[WATER]][c]
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* [[RXN-15910]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 (S)-3-hydroxy-isobutanoyl-CoA[c] '''<=>''' 1 methylacrylyl-CoA[c] '''+''' 1 H2O[c]
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*** [[Tiso_gene_2588]]
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*** [[Tiso_gene_599]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_600]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[Tiso_gene_5857]]
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*** [[orthology-athaliana]]
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** [[pantograph]]-[[athaliana]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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== Reaction(s) not found ==
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* [[Tiso_gene_16145]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15908 RXN-15908]
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15909 RXN-15909]
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* [[Tiso_gene_6885]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14262]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14257]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PLANTCYC : PWY-842
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31175 31175]
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{{#set: taxonomic range=TAX-4479}}
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* LIGAND-RXN:
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{{#set: common name=starch degradation I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04224 R04224]
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{{#set: common name=starch mobilization from cereal endosperm|starch degradation from cereal endosperm}}
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* UNIPROT:
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P21177 P21177]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/Q08426 Q08426]
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{{#set: completion rate=33.0}}
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** [http://www.uniprot.org/uniprot/O29814 O29814]
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** [http://www.uniprot.org/uniprot/O29299 O29299]
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** [http://www.uniprot.org/uniprot/O34893 O34893]
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** [http://www.uniprot.org/uniprot/O23520 O23520]
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** [http://www.uniprot.org/uniprot/P76082 P76082]
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** [http://www.uniprot.org/uniprot/P64016 P64016]
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** [http://www.uniprot.org/uniprot/P07896 P07896]
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** [http://www.uniprot.org/uniprot/O53419 O53419]
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** [http://www.uniprot.org/uniprot/P94549 P94549]
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** [http://www.uniprot.org/uniprot/Q13825 Q13825]
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** [http://www.uniprot.org/uniprot/P45361 P45361]
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** [http://www.uniprot.org/uniprot/P28793 P28793]
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** [http://www.uniprot.org/uniprot/P14604 P14604]
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** [http://www.uniprot.org/uniprot/P22414 P22414]
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** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
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** [http://www.uniprot.org/uniprot/P34559 P34559]
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** [http://www.uniprot.org/uniprot/Q01373 Q01373]
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** [http://www.uniprot.org/uniprot/P55100 P55100]
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** [http://www.uniprot.org/uniprot/P53526 P53526]
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** [http://www.uniprot.org/uniprot/Q39659 Q39659]
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** [http://www.uniprot.org/uniprot/O52797 O52797]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Methylacrylyl-CoA hydratase}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Tiso_gene_5857|Tiso_gene_16145|Tiso_gene_6885|Tiso_gene_14262|Tiso_gene_14257}}
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{{#set: in pathway=VALDEG-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:17, 21 March 2018

Pathway PWY-842

  • taxonomic range:
  • common name:
    • starch degradation I
  • Synonym(s):
    • starch mobilization from cereal endosperm
    • starch degradation from cereal endosperm

Reaction(s) found

1 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

  • PLANTCYC : PWY-842




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-842&oldid=40636"