Difference between revisions of "PWY-7400"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-236 RXN1G-236] == * direction: ** LEFT-TO-RIGHT * common name: ** cis-delta13-3-oxo-C32:1-[ac...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-236 RXN1G-236] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** cis-delta13-3-oxo-C32:1-[acyl-carrier protein] synthase
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** L-arginine biosynthesis IV (archaebacteria)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.M1 EC-2.3.1.M1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''7''' reactions found over '''9''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[cis-delta11-melissoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[cis-delta13-3-oxo-lacceroyl-ACPs]][c] '''+''' 1 [[ACP]][c]
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* [[ARGSUCCINLYA-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 H+[c] '''+''' 1 a cis-delta11-C30:1-[acp][c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a cis-delta13-3-oxo-C32:1-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c]
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*** [[Tiso_gene_2485]]
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** 7 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_19302]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-athaliana]]
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* [[Tiso_gene_15991]]
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*** [[orthology-synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[manual-primary_network]]
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* [[Tiso_gene_14485]]
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*** [[orthology-creinhardtii]]
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** [[pantograph]]-[[esiliculosus]]
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* [[ARGSUCCINSYN-RXN]]
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== Pathways  ==
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** 1 associated gene(s):
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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*** [[Tiso_gene_12592]]
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** '''86''' reactions found over '''182''' reactions in the full pathway
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** 7 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-experimental_annotation]]
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* [[orthology]]:
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*** [[orthology-esiliculosus]]
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** [[pantograph]]:
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*** [[annotation-in-silico_annotation]]
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*** [[esiliculosus]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[CARBPSYN-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_4976]]
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*** [[Tiso_gene_4975]]
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*** [[Tiso_gene_4685]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ORNCARBAMTRANSFER-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18444]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN-15005]]
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** 1 associated gene(s):
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*** [[Tiso_gene_13144]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-15006]]
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** 2 associated gene(s):
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*** [[Tiso_gene_6700]]
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*** [[Tiso_gene_8102]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-15007]]
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** 1 associated gene(s):
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*** [[Tiso_gene_11231]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15003 RXN-15003]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15004 RXN-15004]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=cis-delta13-3-oxo-C32:1-[acyl-carrier protein] synthase}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-2.3.1.M1}}
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{{#set: common name=L-arginine biosynthesis IV (archaebacteria)}}
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{{#set: gene associated=Tiso_gene_19302|Tiso_gene_15991|Tiso_gene_14485}}
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{{#set: reaction found=7}}
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{{#set: in pathway=PWYG-321}}
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{{#set: total reaction=9}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=78.0}}
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{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 19:17, 21 March 2018

Pathway PWY-7400

  • taxonomic range:
  • common name:
    • L-arginine biosynthesis IV (archaebacteria)
  • Synonym(s):

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7400&oldid=40643"