Difference between revisions of "1.14.13.70-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9537 RXN-9537] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * ec numb...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.70-RXN 1.14.13.70-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9537 RXN-9537] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.70-RXN 1.14.13.70-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** polyketide_synthase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/1.14.13.70 EC-1.14.13.70]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
+
 
* Synonym(s):
 
* Synonym(s):
−
** (3R)-hydroxymyristoyl-ACP dehydratase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[R-3-hydroxymyristoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Tetradec-2-enoyl-ACPs]][c]
+
** 3 [[NADPH]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[OBTUSIFOLIOL]][c] '''=>''' 3 [[NADP]][c] '''+''' 4 [[WATER]][c] '''+''' 1 [[ALPHA-METHYL-5-ALPHA-ERGOSTA]][c] '''+''' 1 [[FORMATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R)-3-hydroxymyristoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans tetradec-2-enoyl-[acp][c]
+
** 3 NADPH[c] '''+''' 3 oxygen[c] '''+''' 2 H+[c] '''+''' 1 obtusifoliol[c] '''=>''' 3 NADP+[c] '''+''' 4 H2O[c] '''+''' 1 4α-methyl-5α-ergosta-8,14,24(28)-trien-3β-ol[c] '''+''' 1 formate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9421]]
+
* Gene: [[Tiso_gene_8263]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6884]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_6671]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_6885]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_136]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10876]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
** '''10''' reactions found over '''36''' reactions in the full pathway
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[synechocystis]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14917 14917]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05731 R05731]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: ec number=EC-1.14.13.70}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: gene associated=Tiso_gene_8263}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: in pathway=PWY-2541}}
−
{{#set: ec number=EC-4.2.1.59}}
+
−
{{#set: common name=(3R)-hydroxymyristoyl-ACP dehydratase}}
+
−
{{#set: gene associated=Tiso_gene_9421|Tiso_gene_500|Tiso_gene_6884|Tiso_gene_6671|Tiso_gene_6885|Tiso_gene_136|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_135}}
+
−
{{#set: in pathway=PWY-5971|PWY-5994}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii|synechocystis}}
 
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction source=primary_network}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:18, 21 March 2018

Reaction 1.14.13.70-RXN

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2541, plant sterol biosynthesis: PWY-2541
    • 10 reactions found over 36 reactions in the full pathway

Reconstruction information

External links




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