Difference between revisions of "Tiso gene 15820"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.12-RXN 1.8.4.12-RXN] == * direction: ** REVERSIBLE * common name: ** peptide_methionine-r-sul...")
(Created page with "Category:Gene == Gene Tiso_gene_15820 == * right end position: ** 4417 * transcription direction: ** POSITIVE * left end position: ** 1467 * centisome position: ** 30.6903...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.12-RXN 1.8.4.12-RXN] ==
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== Gene Tiso_gene_15820 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 4417
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* common name:
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* transcription direction:
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** peptide_methionine-r-sulfoxide_reductase
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** POSITIVE
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** ORF
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* left end position:
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** methionine_sulfoxide_reductase_with_associated_domain
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** 1467
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** methionine_sulfoxide_reductase_b
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* centisome position:
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* ec number:
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** 30.690378   
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** [http://enzyme.expasy.org/EC/1.8.4.12 EC-1.8.4.12]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEROXID-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[Protein-L-methionine]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''<=>''' 1 [[Red-Thioredoxin]][c] '''+''' 1 [[Protein-L-methionine-R-S-oxides]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 a [protein]-L-methionine[c] '''+''' 1 an oxidized thioredoxin[c] '''<=>''' 1 a reduced thioredoxin[c] '''+''' 1 a protein-L-methionine-(R)-S-oxide[c]
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* Reaction: [[RXN-14240]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-15288]]
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* [[Tiso_gene_19578]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-17352]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_14455]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN-8635]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_16975]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[PWY-7214]]
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* [[Tiso_gene_18058]]
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* [[PWY-6824]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-7445]]
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* [[Tiso_gene_6049]]
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* [[PWY-5469]]
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** IN-SILICO_ANNOTATION
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* [[PWY-5466]]
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***EC-NUMBER
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* [[PWY-5461]]
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4417}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24164 24164]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1467}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07607 R07607]
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{{#set: centisome position=30.690378    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=PEROXID-RXN|RXN-14240|RXN-15288|RXN-17352|RXN-8635}}
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{{#set: common name=peptide_methionine-r-sulfoxide_reductase}}
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{{#set: pathway associated=PWY-7214|PWY-6824|PWY-7445|PWY-5469|PWY-5466|PWY-5461}}
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{{#set: common name=ORF}}
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{{#set: common name=methionine_sulfoxide_reductase_with_associated_domain}}
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{{#set: common name=methionine_sulfoxide_reductase_b}}
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{{#set: ec number=EC-1.8.4.12}}
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{{#set: gene associated=Tiso_gene_19578|Tiso_gene_14455|Tiso_gene_16975|Tiso_gene_18058|Tiso_gene_6049}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:18, 21 March 2018

Gene Tiso_gene_15820

  • right end position:
    • 4417
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1467
  • centisome position:
    • 30.690378
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15820&oldid=40808"