Difference between revisions of "3-OXOACYL-ACP-SYNTH-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7248 PWY-7248] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-RXN 3-OXOACYL-ACP-SYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7248 PWY-7248] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-RXN 3-OXOACYL-ACP-SYNTH-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** pectin degradation III
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** polyketide_synthase
 +
** 3-oxoacyl-synthase
 +
* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''1''' reaction(s) found
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* With identifiers:
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** [[GALACTUROISOM-RXN]]
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** 1 [[Saturated-Fatty-Acyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[B-KETOACYL-ACP]][c] '''+''' 1 [[ACP]][c]
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== Reaction(s) not found ==
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* With common name(s):
−
* '''4''' reaction(s) not found
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** 1 a 2,3,4-saturated fatty acyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a 3-oxoacyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c]
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** [http://metacyc.org/META/NEW-IMAGE?object=GALACTURAN-14-ALPHA-GALACTURONIDASE-RXN GALACTURAN-14-ALPHA-GALACTURONIDASE-RXN]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14362 RXN-14362]
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== Genes associated with this reaction ==
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** [http://metacyc.org/META/NEW-IMAGE?object=PECTINESTERASE-RXN PECTINESTERASE-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14753 RXN-14753]
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* Gene: [[Tiso_gene_135]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_19302]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_5939]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_500]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_14485]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_15991]]
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** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
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* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated: [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=pectin degradation III}}
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** [http://www.uniprot.org/uniprot/P23902 P23902]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P0A6R0 P0A6R0]
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{{#set: reaction not found=4}}
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** [http://www.uniprot.org/uniprot/P49327 P49327]
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** [http://www.uniprot.org/uniprot/P43710 P43710]
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** [http://www.uniprot.org/uniprot/Q9HYR2 Q9HYR2]
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** [http://www.uniprot.org/uniprot/O67612 O67612]
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** [http://www.uniprot.org/uniprot/P20582 P20582]
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** [http://www.uniprot.org/uniprot/Q9JT63 Q9JT63]
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** [http://www.uniprot.org/uniprot/Q9JW56 Q9JW56]
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** [http://www.uniprot.org/uniprot/Q9PMZ6 Q9PMZ6]
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** [http://www.uniprot.org/uniprot/P43711 P43711]
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** [http://www.uniprot.org/uniprot/O25284 O25284]
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** [http://www.uniprot.org/uniprot/Q9JX65 Q9JX65]
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** [http://www.uniprot.org/uniprot/O34340 O34340]
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** [http://www.uniprot.org/uniprot/Q9PI63 Q9PI63]
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** [http://www.uniprot.org/uniprot/P0AAI5 P0AAI5]
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** [http://www.uniprot.org/uniprot/Q07510 Q07510]
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** [http://www.uniprot.org/uniprot/Q06097 Q06097]
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** [http://www.uniprot.org/uniprot/P41175 P41175]
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** [http://www.uniprot.org/uniprot/P31176 P31176]
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** [http://www.uniprot.org/uniprot/Q40027 Q40027]
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** [http://www.uniprot.org/uniprot/Q40028 Q40028]
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** [http://www.uniprot.org/uniprot/P73283 P73283]
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** [http://www.uniprot.org/uniprot/P0A953 P0A953]
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** [http://www.uniprot.org/uniprot/O64485 O64485]
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** [http://www.uniprot.org/uniprot/O65677 O65677]
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** [http://www.uniprot.org/uniprot/Q39310 Q39310]
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** [http://www.uniprot.org/uniprot/O23738 O23738]
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** [http://www.uniprot.org/uniprot/Q41134 Q41134]
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** [http://www.uniprot.org/uniprot/Q41135 Q41135]
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** [http://www.uniprot.org/uniprot/Q54208 Q54208]
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** [http://www.uniprot.org/uniprot/O54440 O54440]
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** [http://www.uniprot.org/uniprot/P55338 P55338]
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** [http://www.uniprot.org/uniprot/Q9RA31 Q9RA31]
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** [http://www.uniprot.org/uniprot/P12276 P12276]
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** [http://www.uniprot.org/uniprot/P12785 P12785]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=polyketide_synthase}}
 +
{{#set: common name=3-oxoacyl-synthase}}
 +
{{#set: ec number=EC-2.3.1.86}}
 +
{{#set: ec number=EC-2.3.1.85}}
 +
{{#set: ec number=EC-2.3.1.41}}
 +
{{#set: gene associated=Tiso_gene_135|Tiso_gene_19302|Tiso_gene_5939|Tiso_gene_500|Tiso_gene_136|Tiso_gene_13394|Tiso_gene_14485|Tiso_gene_10876|Tiso_gene_15991}}
 +
{{#set: in pathway=FASYN-ELONG-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:18, 21 March 2018

Reaction 3-OXOACYL-ACP-SYNTH-RXN

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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