Difference between revisions of "PWY-7159"

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(Created page with "Category:Gene == Gene Tiso_gene_10345 == * left end position: ** 5754 * transcription direction: ** POSITIVE * right end position: ** 8151 * centisome position: ** 66.7904...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_10345 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] ==
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* left end position:
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* taxonomic range:
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** 5754
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-241806]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** POSITIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** 8151
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3312 TAX-3312]
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* centisome position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3208 TAX-3208]
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** 66.79048   
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* common name:
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** 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
 
* Synonym(s):
 
* Synonym(s):
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** light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[2.8.1.6-RXN]]
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'''8''' reactions found over '''9''' reactions in the full pathway
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** in-silico_annotation
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* [[PROTOPORGENOXI-RXN]]
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***automated-name-match
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** 2 associated gene(s):
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** experimental_annotation
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*** [[Tiso_gene_11986]]
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***automated-name-match
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*** [[Tiso_gene_15401]]
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** [[pantograph]]-[[esiliculosus]]
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** 6 reconstruction source(s) associated:
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* [[RXN-17472]]
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*** [[annotation-experimental_annotation]]
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** in-silico_annotation
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*** [[orthology-esiliculosus]]
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***automated-name-match
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*** [[annotation-in-silico_annotation]]
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** experimental_annotation
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*** [[orthology-athaliana]]
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***automated-name-match
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*** [[orthology-synechocystis]]
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* [[RXN-17473]]
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*** [[manual-primary_network]]
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** in-silico_annotation
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* [[RXN-5282]]
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***automated-name-match
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** 0 associated gene:
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** experimental_annotation
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** 1 reconstruction source(s) associated:
−
***automated-name-match
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*** [[manual-primary_network]]
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== Pathways associated ==
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* [[RXN-5283]]
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* [[PWY0-1507]]
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** 0 associated gene:
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* [[PWY-7380]]
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[RXN-5284]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_19451]]
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** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RXN0-1461]]
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** 5 associated gene(s):
 +
*** [[Tiso_gene_3671]]
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*** [[Tiso_gene_2247]]
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*** [[Tiso_gene_13364]]
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*** [[Tiso_gene_13365]]
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*** [[Tiso_gene_2246]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN1F-20]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_11960]]
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*** [[Tiso_gene_5993]]
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*** [[Tiso_gene_9870]]
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** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[UROGENDECARBOX-RXN]]
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** 4 associated gene(s):
 +
*** [[Tiso_gene_18743]]
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*** [[Tiso_gene_19684]]
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*** [[Tiso_gene_18744]]
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*** [[Tiso_gene_5173]]
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** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17485 RXN-17485]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5754}}
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* PLANTCYC : PWY-7159
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-241806}}
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{{#set: right end position=8151}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: centisome position=66.79048    }}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: reaction associated=2.8.1.6-RXN|RXN-17472|RXN-17473}}
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{{#set: taxonomic range=TAX-3041}}
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{{#set: pathway associated=PWY0-1507|PWY-7380}}
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{{#set: taxonomic range=TAX-3312}}
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{{#set: taxonomic range=TAX-3208}}
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{{#set: common name=3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)}}
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{{#set: common name=light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis}}
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{{#set: reaction found=8}}
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{{#set: total reaction=9}}
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{{#set: completion rate=89.0}}

Latest revision as of 19:19, 21 March 2018

Pathway PWY-7159

  • taxonomic range:
  • common name:
    • 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
  • Synonym(s):
    • light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis

Reaction(s) found

8 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

  • PLANTCYC : PWY-7159






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