Difference between revisions of "Tiso gene 9490"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.18-RXN 1.14.11.18-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** protein_involved_...")
(Created page with "Category:Gene == Gene Tiso_gene_9490 == * right end position: ** 4313 * transcription direction: ** POSITIVE * left end position: ** 4162 * centisome position: ** 44.77194...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.18-RXN 1.14.11.18-RXN] ==
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== Gene Tiso_gene_9490 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4313
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* common name:
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* transcription direction:
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** protein_involved_in_biosynthesis_of_mitomycin_antibiotics_polyketide_fumonisin
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.14.11.18 EC-1.14.11.18]
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** 4162
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* centisome position:
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** 44.771946   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADENYLYLSULFKIN-RXN]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-206]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[2-HYDROXYPHYTANOYL-COA]][c]
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** Source: [[orthology-synechocystis]]
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* With common name(s):
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* Reaction: [[INORGPYROPHOSPHAT-RXN]]
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** 1 2-oxoglutarate[c] '''+''' 1 phytanoyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 succinate[c] '''+''' 1 CO2[c] '''+''' 1 2-hydroxyphytanoyl-CoA[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-synechocystis]]
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* [[Tiso_gene_13319]]
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** Source: [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
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** Source: [[orthology-creinhardtii]]
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* [[Tiso_gene_14707]]
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== Pathways associated ==
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-7805]]
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* [[Tiso_gene_14450]]
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* [[PWY-7807]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-5340]]
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* [[Tiso_gene_561]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16200]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4313}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16065 16065]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=4162}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05722 R05722]
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{{#set: centisome position=44.771946    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ADENYLYLSULFKIN-RXN|INORGPYROPHOSPHAT-RXN}}
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{{#set: common name=protein_involved_in_biosynthesis_of_mitomycin_antibiotics_polyketide_fumonisin}}
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{{#set: pathway associated=PWY-7805|PWY-7807|PWY-5340}}
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{{#set: ec number=EC-1.14.11.18}}
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{{#set: gene associated=Tiso_gene_13319|Tiso_gene_14707|Tiso_gene_14450|Tiso_gene_561|Tiso_gene_16200}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:19, 21 March 2018

Gene Tiso_gene_9490

  • right end position:
    • 4313
  • transcription direction:
    • POSITIVE
  • left end position:
    • 4162
  • centisome position:
    • 44.771946
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9490&oldid=40898"