Difference between revisions of "PWY-6722"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** phosp...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6722 PWY-6722] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1883 TAX-18...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6722 PWY-6722] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1883 TAX-1883]
 
* common name:
 
* common name:
** ORF
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** candicidin biosynthesis
** phosphoserine_aminotransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''6''' reactions in the full pathway
** 1 [[GLT]][c] '''+''' 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-PHOSPHONOOXY-THREONINE]][c]
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
* With common name(s):
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** 4 associated gene(s):
** 1 L-glutamate[c] '''+''' 1 (3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 4-phospho-hydroxy-L-threonine[c]
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*** [[Tiso_gene_2812]]
 
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*** [[Tiso_gene_3800]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_5029]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_7965]]
* [[Tiso_gene_17123]]
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** 5 reconstruction source(s) associated:
** IN-SILICO_ANNOTATION
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*** [[annotation-experimental_annotation]]
***EC-NUMBER
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*** [[orthology-athaliana]]
** EXPERIMENTAL_ANNOTATION
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*** [[annotation-in-silico_annotation]]
***EC-NUMBER
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*** [[manual-primary_network]]
** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
* [[Tiso_gene_15686]]
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== Reaction(s) not found ==
** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12161 RXN-12161]
***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12162 RXN-12162]
** EXPERIMENTAL_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15954 RXN-15954]
***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15971 RXN-15971]
** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15975 RXN-15975]
== Pathways  ==
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* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-1883}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16573 16573]
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{{#set: common name=candicidin biosynthesis}}
* LIGAND-RXN:
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{{#set: reaction found=1}}
** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
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{{#set: total reaction=6}}
{{#set: direction=REVERSIBLE}}
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{{#set: completion rate=17.0}}
{{#set: common name=ORF}}
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{{#set: common name=phosphoserine_aminotransferase}}
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{{#set: ec number=EC-2.6.1.52}}
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{{#set: gene associated=Tiso_gene_17123|Tiso_gene_15686}}
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{{#set: in pathway=PYRIDOXSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:20, 21 March 2018

Pathway PWY-6722

  • taxonomic range:
  • common name:
    • candicidin biosynthesis
  • Synonym(s):

Reaction(s) found

1 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links