Difference between revisions of "PWY-6993"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] == * direction: ** REVERSIBLE * common name: ** geranylgeranyl_diphosphate_reduc...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** geranylgeranyl_diphosphate_reductase
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** nicotine degradation II (pyrrolidine pathway)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''11''' reactions in the full pathway
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** 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7003]][c]
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* [[RXN-646]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 phytyl diphosphate[c] '''+''' 1 NADP+[c] '''<=>''' 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 tetrahydrogeranylgeranyl diphosphate[c]
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*** [[Tiso_gene_14341]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_2613]]
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* [[SUCCSEMIALDDEHYDROG-RXN]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_6952]]
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** EXPERIMENTAL_ANNOTATION
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** 1 reconstruction source(s) associated:
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***AUTOMATED-NAME-MATCH
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*** [[orthology-synechocystis]]
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== Pathways  ==
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== Reaction(s) not found ==
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* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.9-RXN 1.13.11.9-RXN]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=MALEATE-ISOMERASE-RXN MALEATE-ISOMERASE-RXN]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11318 RXN-11318]
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* [[annotation]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13076 RXN-13076]
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** [[pathwaytools]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13077 RXN-13077]
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*** [[experimental_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13081 RXN-13081]
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*** [[in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13082 RXN-13082]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13088 RXN-13088]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13089 RXN-13089]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08756 R08756]
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{{#set: common name=nicotine degradation II (pyrrolidine pathway)}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction found=2}}
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{{#set: common name=geranylgeranyl_diphosphate_reductase}}
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{{#set: total reaction=11}}
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{{#set: gene associated=Tiso_gene_2613}}
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{{#set: completion rate=18.0}}
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{{#set: in pathway=PWY-5063}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:21, 21 March 2018

Pathway PWY-6993

  • taxonomic range:
  • common name:
    • nicotine degradation II (pyrrolidine pathway)
  • Synonym(s):

Reaction(s) found

2 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6993&oldid=41040"