Difference between revisions of "BIOTIN-CARBOXYL-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6883 RXN-6883] == * direction: ** LEFT-TO-RIGHT * common name: ** alternative_oxidase * ec numb...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTIN-CARBOXYL-RXN BIOTIN-CARBOXYL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6883 RXN-6883] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTIN-CARBOXYL-RXN BIOTIN-CARBOXYL-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** alternative_oxidase
+
** acetyl-_carboxylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.10.3.11 EC-1.10.3.11]
+
** [http://enzyme.expasy.org/EC/6.3.4.14 EC-6.3.4.14]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[Ubiquinols]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[Ubiquinones]][c]
+
** 1 [[BCCP-dimers]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Carboxybiotin-BCCP]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 an ubiquinol[c] '''+''' 1 oxygen[c] '''=>''' 2 H2O[c] '''+''' 2 a ubiquinone[c]
+
** 1 a biotinylated [BCCP dimer][c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 ATP[c] '''=>''' 1 phosphate[c] '''+''' 1 a carboxylated-biotinylated [BCCP dimer][c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8278]]
+
* Gene: [[Tiso_gene_7965]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_17130]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_7486]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_7953]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-4302]], aerobic respiration III (alternative oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302]
+
* [[PWY0-1264]], biotin-carboxyl carrier protein assembly: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1264 PWY0-1264]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pathwaytools]]:
+
*** Tool: [[pathwaytools]]
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30258 30258]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09504 R09504]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04385 R04385]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q06862 Q06862]
 +
** [http://www.uniprot.org/uniprot/O67483 O67483]
 +
** [http://www.uniprot.org/uniprot/Q9CHF3 Q9CHF3]
 +
** [http://www.uniprot.org/uniprot/Q58626 Q58626]
 +
** [http://www.uniprot.org/uniprot/P43873 P43873]
 +
** [http://www.uniprot.org/uniprot/Q9PN09 Q9PN09]
 +
** [http://www.uniprot.org/uniprot/Q9JW07 Q9JW07]
 +
** [http://www.uniprot.org/uniprot/P24182 P24182]
 +
** [http://www.uniprot.org/uniprot/O04983 O04983]
 +
** [http://www.uniprot.org/uniprot/O81273 O81273]
 +
** [http://www.uniprot.org/uniprot/Q42777 Q42777]
 +
** [http://www.uniprot.org/uniprot/Q39825 Q39825]
 +
** [http://www.uniprot.org/uniprot/O23960 O23960]
 +
** [http://www.uniprot.org/uniprot/O52602 O52602]
 +
** [http://www.uniprot.org/uniprot/Q9R9I4 Q9R9I4]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=alternative_oxidase}}
+
{{#set: common name=acetyl-_carboxylase}}
−
{{#set: ec number=EC-1.10.3.11}}
+
{{#set: ec number=EC-6.3.4.14}}
−
{{#set: gene associated=Tiso_gene_8278|Tiso_gene_17130|Tiso_gene_7486|Tiso_gene_7953}}
+
{{#set: gene associated=Tiso_gene_7965}}
−
{{#set: in pathway=PWY-4302}}
+
{{#set: in pathway=PWY0-1264}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:14, 21 March 2018

Reaction BIOTIN-CARBOXYL-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acetyl-_carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a biotinylated [BCCP dimer][c] + 1 hydrogencarbonate[c] + 1 ATP[c] => 1 phosphate[c] + 1 a carboxylated-biotinylated [BCCP dimer][c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1264, biotin-carboxyl carrier protein assembly: PWY0-1264
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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