Difference between revisions of "Tiso gene 13506"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] == * direction: ** L...")
(Created page with "Category:Gene == Gene Tiso_gene_13506 == * right end position: ** 2245 * transcription direction: ** POSITIVE * left end position: ** 786 * centisome position: ** 12.576...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] ==
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== Gene Tiso_gene_13506 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2245
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* common name:
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* transcription direction:
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** peptide-aspartate_beta-dioxygenase
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** POSITIVE
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** aspartyl_asparaginyl_beta-hydroxylase
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* left end position:
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** aspartyl_asparaginylbeta-hydroxylase
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** 786
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.14.11.16 EC-1.14.11.16]
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** 12.576   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GUANPRIBOSYLTRAN-RXN]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Protein-L-Aspartates]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c] '''+''' 1 [[SUC]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 a [protein]-L-aspartate[c] '''=>''' 1 CO2[c] '''+''' 1 a [protein]-3-hydroxy-L-aspartate[c] '''+''' 1 succinate[c]
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* Reaction: [[HYPOXANPRIBOSYLTRAN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[XANPRIBOSYLTRAN-RXN]]
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* [[Tiso_gene_19054]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: automated-name-match
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* [[Tiso_gene_7632]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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* [[PWY-6609]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-6620]]
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* [[Tiso_gene_17769]]
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* [[PWY-6599]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6610]]
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***AUTOMATED-NAME-MATCH
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* [[SALVPURINE2-PWY]]
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* [[Tiso_gene_10501]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7631]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16225]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17313]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19156]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2245}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=786}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073]
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{{#set: centisome position=12.576    }}
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* UNIPROT:
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{{#set: reaction associated=GUANPRIBOSYLTRAN-RXN|HYPOXANPRIBOSYLTRAN-RXN|XANPRIBOSYLTRAN-RXN}}
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** [http://www.uniprot.org/uniprot/Q28056 Q28056]
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{{#set: pathway associated=PWY-6609|PWY-6620|PWY-6599|PWY-6610|SALVPURINE2-PWY}}
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** [http://www.uniprot.org/uniprot/Q93178 Q93178]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=peptide-aspartate_beta-dioxygenase}}
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{{#set: common name=aspartyl_asparaginyl_beta-hydroxylase}}
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{{#set: common name=aspartyl_asparaginylbeta-hydroxylase}}
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{{#set: ec number=EC-1.14.11.16}}
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{{#set: gene associated=Tiso_gene_19054|Tiso_gene_7632|Tiso_gene_17769|Tiso_gene_10501|Tiso_gene_7631|Tiso_gene_16225|Tiso_gene_17313|Tiso_gene_19156}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:23, 21 March 2018

Gene Tiso_gene_13506

  • right end position:
    • 2245
  • transcription direction:
    • POSITIVE
  • left end position:
    • 786
  • centisome position:
    • 12.576
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13506&oldid=41249"