Difference between revisions of "PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-81 RXN66-81] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** fad-containing_monooxy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] == * direction: ** L...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-81 RXN66-81] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** peptide-aspartate_beta-dioxygenase
−
** fad-containing_monooxygenase
+
** aspartyl_asparaginyl_beta-hydroxylase
 +
** aspartyl_asparaginylbeta-hydroxylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.13.8 EC-1.14.13.8]
+
** [http://enzyme.expasy.org/EC/1.14.11.16 EC-1.14.11.16]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NICOTINE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-2743]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[Protein-L-Aspartates]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-nicotine[c] '''+''' 1 NADPH[c] '''+''' 1 oxygen[c] '''=>''' 1 nicotine-1'-N-oxide[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c]
+
** 1 a [protein]-L-aspartate[c] '''+''' 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 a [protein]-3-hydroxy-L-aspartate[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9139]]
+
* Gene: [[Tiso_gene_7631]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_4]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_19054]]
−
* [[Tiso_gene_9613]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_17313]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_10501]]
−
* [[Tiso_gene_10094]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_17769]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_19156]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_16225]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_7632]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-201]], nicotine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-201 PWY66-201]
 
−
** '''3''' reactions found over '''17''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q28056 Q28056]
 +
** [http://www.uniprot.org/uniprot/Q93178 Q93178]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=peptide-aspartate_beta-dioxygenase}}
−
{{#set: common name=fad-containing_monooxygenase}}
+
{{#set: common name=aspartyl_asparaginyl_beta-hydroxylase}}
−
{{#set: ec number=EC-1.14.13.8}}
+
{{#set: common name=aspartyl_asparaginylbeta-hydroxylase}}
−
{{#set: gene associated=Tiso_gene_9139|Tiso_gene_4|Tiso_gene_9613|Tiso_gene_10094}}
+
{{#set: ec number=EC-1.14.11.16}}
−
{{#set: in pathway=PWY66-201}}
+
{{#set: gene associated=Tiso_gene_7631|Tiso_gene_19054|Tiso_gene_17313|Tiso_gene_10501|Tiso_gene_17769|Tiso_gene_19156|Tiso_gene_16225|Tiso_gene_7632}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:23, 21 March 2018

Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • peptide-aspartate_beta-dioxygenase
    • aspartyl_asparaginyl_beta-hydroxylase
    • aspartyl_asparaginylbeta-hydroxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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