Difference between revisions of "RXN-14227"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-DIPHOSPHATASE-RXN GUANOSINE-DIPHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14227 RXN-14227] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_deoxy_cytosolic_type_c_pr...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14227 RXN-14227] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
+ | ** 5_deoxy_cytosolic_type_c_protein | ||
+ | ** 5_-nucleotidase | ||
+ | ** probable_cytosolic_imp-gmp_specific_5_-nucleotidase | ||
** ORF | ** ORF | ||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/3 | + | ** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[WATER]][c] '''+''' 1 [[ | + | ** 1 [[WATER]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CPD-8259]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 H2O[c] '''+''' 1 | + | ** 1 H2O[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''=>''' 1 phosphate[c] '''+''' 1 β-D-ribosylnicotinate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * Gene: [[Tiso_gene_6640]] |
− | ** [[ | + | ** Source: [[orthology-esiliculosus]] |
− | * [[ | + | * Gene: [[Tiso_gene_5911]] |
− | ** | + | ** Source: [[annotation-in-silico_annotation]] |
− | ***EC-NUMBER | + | *** Assignment: AUTOMATED-NAME-MATCH |
− | ** | + | * Gene: [[Tiso_gene_14434]] |
− | ***EC-NUMBER | + | ** Source: [[annotation-in-silico_annotation]] |
− | ** [[ | + | *** Assignment: EC-NUMBER |
− | ** [[ | + | * Gene: [[Tiso_gene_6988]] |
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_14246]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_14435]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_13929]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[orthology]] | + | * Category: [[orthology]] |
− | ** | + | ** Source: [[orthology-esiliculosus]] |
− | + | *** Tool: [[pantograph]] | |
− | *** [[ | + | * Category: [[annotation]] |
− | * [[annotation]] | + | ** Source: [[annotation-in-silico_annotation]] |
− | ** | + | *** Tool: [[pathwaytools]] |
− | + | ||
− | *** [[ | + | |
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30938 30938] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03346 R03346] |
− | + | ||
− | + | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=5_deoxy_cytosolic_type_c_protein}} | ||
+ | {{#set: common name=5_-nucleotidase}} | ||
+ | {{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}} | ||
{{#set: common name=ORF}} | {{#set: common name=ORF}} | ||
− | {{#set: ec number=EC-3 | + | {{#set: ec number=EC-3.1.3.5}} |
− | {{#set: gene associated= | + | {{#set: gene associated=Tiso_gene_6640|Tiso_gene_5911|Tiso_gene_14434|Tiso_gene_6988|Tiso_gene_14246|Tiso_gene_14435|Tiso_gene_13929}} |
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
− | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=orthology|annotation}} |
− | + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | |
− | {{#set: reconstruction source= | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
− | + | ||
− | {{#set: reconstruction tool=pathwaytools | + | |
− | + |
Latest revision as of 19:23, 21 March 2018
Contents
Reaction RXN-14227
- direction:
- LEFT-TO-RIGHT
- common name:
- 5_deoxy_cytosolic_type_c_protein
- 5_-nucleotidase
- probable_cytosolic_imp-gmp_specific_5_-nucleotidase
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 NICOTINATE_NUCLEOTIDE[c] => 1 Pi[c] + 1 CPD-8259[c]
- With common name(s):
- 1 H2O[c] + 1 β-nicotinate D-ribonucleotide[c] => 1 phosphate[c] + 1 β-D-ribosylnicotinate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_6640
- Source: orthology-esiliculosus
- Gene: Tiso_gene_5911
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14434
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_6988
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14246
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14435
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_13929
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links