Difference between revisions of "Tiso gene 2851"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2601 RXN0-2601] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidopyrimidine-dna_gly...")
(Created page with "Category:Gene == Gene Tiso_gene_2851 == * right end position: ** 18195 * transcription direction: ** POSITIVE * left end position: ** 17117 * centisome position: ** 93.617...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2601 RXN0-2601] ==
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== Gene Tiso_gene_2851 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 18195
* common name:
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* transcription direction:
** formamidopyrimidine-dna_glycosylase
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** POSITIVE
** dna_glycosylase
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* left end position:
** dna-(apurinic_or_apyrimidinic_site)_lyase
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** 17117
* ec number:
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* centisome position:
** [http://enzyme.expasy.org/EC/4.2.99.18 EC-4.2.99.18]
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** 93.61737   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[INORGPYROPHOSPHAT-RXN]]
** 1 [[Damaged-DNA-Pyrimidine]][c] '''=>''' 1 [[DNA-containing-a-Apyrimidinic-Sites]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: ec-number
** 1 a damaged DNA pyrimidine[c] '''=>''' 1 an apyrimidinic site in DNA[c]
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
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** Source: [[annotation-in-silico_annotation]]
== Genes associated with this reaction  ==
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*** Assignment: ec-number
Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
* [[Tiso_gene_16492]]
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* [[PWY-7805]]
** IN-SILICO_ANNOTATION
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* [[PWY-7807]]
***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_1280]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19077]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_19078]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16493]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6558]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11590]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14609]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17380]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=18195}}
{{#set: common name=formamidopyrimidine-dna_glycosylase}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=dna_glycosylase}}
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{{#set: left end position=17117}}
{{#set: common name=dna-(apurinic_or_apyrimidinic_site)_lyase}}
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{{#set: centisome position=93.61737    }}
{{#set: ec number=EC-4.2.99.18}}
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{{#set: reaction associated=INORGPYROPHOSPHAT-RXN|TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
{{#set: gene associated=Tiso_gene_16492|Tiso_gene_1280|Tiso_gene_19077|Tiso_gene_19078|Tiso_gene_16493|Tiso_gene_6558|Tiso_gene_11590|Tiso_gene_14609|Tiso_gene_17380}}
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{{#set: pathway associated=PWY-7805|PWY-7807}}
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:23, 21 March 2018

Gene Tiso_gene_2851

  • right end position:
    • 18195
  • transcription direction:
    • POSITIVE
  • left end position:
    • 17117
  • centisome position:
    • 93.61737
  • Synonym(s):

Reactions associated

Pathways associated

External links