Difference between revisions of "RXN-8340"

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(Created page with "Category:Gene == Gene Tiso_gene_17311 == * left end position: ** 435 * transcription direction: ** NEGATIVE * right end position: ** 3641 * centisome position: ** 11.46547...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8340 RXN-8340] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/4....")
 
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_17311 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8340 RXN-8340] ==
* left end position:
+
* direction:
** 435
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/4.1.99.22 EC-4.1.99.22]
* right end position:
+
** 3641
+
* centisome position:
+
** 11.465472   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* [[DXS-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[Donor-H2]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[CH33ADO]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[CPD-19179]][c]
***ec-number
+
* With common name(s):
** experimental_annotation
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** 1 a reduced electron acceptor[c] '''+''' 1 GTP[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 5'-deoxyadenosine[c] '''+''' 1 H+[c] '''+''' 1 an oxidized electron acceptor[c] '''+''' 1 L-methionine[c] '''+''' 1 (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate[c]
***ec-number
+
 
** [[pantograph]]-[[athaliana]]
+
== Genes associated with this reaction  ==
** [[pantograph]]-[[synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_7986]]
** [[pantograph]]-[[creinhardtii]]
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** Source: [[orthology-esiliculosus]]
== Pathways associated ==
+
== Pathways  ==
* [[NONMEVIPP-PWY]]
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* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
* [[PYRIDOXSYN-PWY]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
* [[PWY-6891]]
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== Reconstruction information  ==
* [[PWY-6892]]
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* Category: [[orthology]]
* [[PWY-7560]]
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** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=435}}
+
* RHEA:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26377 26377]
{{#set: right end position=3641}}
+
* LIGAND-RXN:
{{#set: centisome position=11.465472    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R09394 R09394]
{{#set: reaction associated=DXS-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: pathway associated=NONMEVIPP-PWY|PYRIDOXSYN-PWY|PWY-6891|PWY-6892|PWY-7560}}
+
{{#set: ec number=EC-4.1.99.22}}
 +
{{#set: gene associated=Tiso_gene_7986}}
 +
{{#set: in pathway=PWY-6823}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:24, 21 March 2018

Reaction RXN-8340

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a reduced electron acceptor[c] + 1 GTP[c] + 1 S-adenosyl-L-methionine[c] => 1 5'-deoxyadenosine[c] + 1 H+[c] + 1 an oxidized electron acceptor[c] + 1 L-methionine[c] + 1 (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6823, molybdenum cofactor biosynthesis: PWY-6823
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links