Difference between revisions of "Tiso gene 11163"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATESYN-RXN GLUTAMATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-de...")
 
(Created page with "Category:Gene == Gene Tiso_gene_11163 == * right end position: ** 2110 * transcription direction: ** POSITIVE * left end position: ** 541 * centisome position: ** 6.776901...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATESYN-RXN GLUTAMATESYN-RXN] ==
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== Gene Tiso_gene_11163 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2110
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* common name:
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* transcription direction:
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** ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits
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** POSITIVE
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** glutamate_synthase
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* left end position:
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* ec number:
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** 541
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** [http://enzyme.expasy.org/EC/1.4.1.13 EC-1.4.1.13]
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* centisome position:
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** 6.776901   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[OROPRIBTRANS-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[NADP]][c] '''+''' 2 [[GLT]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NADPH[c] '''+''' 1 L-glutamine[c] '''+''' 1 H+[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 NADP+[c] '''+''' 2 L-glutamate[c]
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== Pathways associated ==
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* [[PWY-7790]]
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== Genes associated with this reaction  ==
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* [[PWY-7791]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5686]]
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* [[Tiso_gene_1154]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2581]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_11511]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[GLUTAMINEFUM-PWY]], L-glutamine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINEFUM-PWY GLUTAMINEFUM-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[GLUTSYN-PWY]], L-glutamate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYN-PWY GLUTSYN-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2110}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15501 15501]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=541}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00114 R00114]
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{{#set: centisome position=6.776901    }}
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* UNIPROT:
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{{#set: reaction associated=OROPRIBTRANS-RXN}}
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** [http://www.uniprot.org/uniprot/Q05756 Q05756]
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{{#set: pathway associated=PWY-7790|PWY-7791|PWY-5686}}
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** [http://www.uniprot.org/uniprot/Q05755 Q05755]
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** [http://www.uniprot.org/uniprot/Q9PJA4 Q9PJA4]
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** [http://www.uniprot.org/uniprot/Q9PJA2 Q9PJA2]
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** [http://www.uniprot.org/uniprot/Q9CG25 Q9CG25]
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** [http://www.uniprot.org/uniprot/Q58746 Q58746]
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** [http://www.uniprot.org/uniprot/P09831 P09831]
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** [http://www.uniprot.org/uniprot/Q9CG24 Q9CG24]
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** [http://www.uniprot.org/uniprot/P09832 P09832]
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** [http://www.uniprot.org/uniprot/P39812 P39812]
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** [http://www.uniprot.org/uniprot/Q9S2Y9 Q9S2Y9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits}}
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{{#set: common name=glutamate_synthase}}
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{{#set: ec number=EC-1.4.1.13}}
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{{#set: gene associated=Tiso_gene_1154|Tiso_gene_2581|Tiso_gene_11511}}
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{{#set: in pathway=GLUTAMINEFUM-PWY|GLUTSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:15, 21 March 2018

Gene Tiso_gene_11163

  • right end position:
    • 2110
  • transcription direction:
    • POSITIVE
  • left end position:
    • 541
  • centisome position:
    • 6.776901
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11163&oldid=40420"