Difference between revisions of "Tiso gene 11163"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATESYN-RXN GLUTAMATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-de...")
 
(Created page with "Category:Gene == Gene Tiso_gene_11163 == * right end position: ** 2110 * transcription direction: ** POSITIVE * left end position: ** 541 * centisome position: ** 6.776901...")
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATESYN-RXN GLUTAMATESYN-RXN] ==
+
== Gene Tiso_gene_11163 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 2110
−
* common name:
+
* transcription direction:
−
** ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits
+
** POSITIVE
−
** glutamate_synthase
+
* left end position:
−
* ec number:
+
** 541
−
** [http://enzyme.expasy.org/EC/1.4.1.13 EC-1.4.1.13]
+
* centisome position:
 +
** 6.776901   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[OROPRIBTRANS-RXN]]
−
** 1 [[NADPH]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[NADP]][c] '''+''' 2 [[GLT]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 NADPH[c] '''+''' 1 L-glutamine[c] '''+''' 1 H+[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 NADP+[c] '''+''' 2 L-glutamate[c]
+
== Pathways associated ==
−
 
+
* [[PWY-7790]]
−
== Genes associated with this reaction  ==
+
* [[PWY-7791]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[PWY-5686]]
−
* [[Tiso_gene_1154]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_2581]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_11511]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[GLUTAMINEFUM-PWY]], L-glutamine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINEFUM-PWY GLUTAMINEFUM-PWY]
+
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
−
* [[GLUTSYN-PWY]], L-glutamate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYN-PWY GLUTSYN-PWY]
+
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[athaliana]]
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=2110}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15501 15501]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=541}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00114 R00114]
+
{{#set: centisome position=6.776901    }}
−
* UNIPROT:
+
{{#set: reaction associated=OROPRIBTRANS-RXN}}
−
** [http://www.uniprot.org/uniprot/Q05756 Q05756]
+
{{#set: pathway associated=PWY-7790|PWY-7791|PWY-5686}}
−
** [http://www.uniprot.org/uniprot/Q05755 Q05755]
+
−
** [http://www.uniprot.org/uniprot/Q9PJA4 Q9PJA4]
+
−
** [http://www.uniprot.org/uniprot/Q9PJA2 Q9PJA2]
+
−
** [http://www.uniprot.org/uniprot/Q9CG25 Q9CG25]
+
−
** [http://www.uniprot.org/uniprot/Q58746 Q58746]
+
−
** [http://www.uniprot.org/uniprot/P09831 P09831]
+
−
** [http://www.uniprot.org/uniprot/Q9CG24 Q9CG24]
+
−
** [http://www.uniprot.org/uniprot/P09832 P09832]
+
−
** [http://www.uniprot.org/uniprot/P39812 P39812]
+
−
** [http://www.uniprot.org/uniprot/Q9S2Y9 Q9S2Y9]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits}}
+
−
{{#set: common name=glutamate_synthase}}
+
−
{{#set: ec number=EC-1.4.1.13}}
+
−
{{#set: gene associated=Tiso_gene_1154|Tiso_gene_2581|Tiso_gene_11511}}
+
−
{{#set: in pathway=GLUTAMINEFUM-PWY|GLUTSYN-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:15, 21 March 2018

Gene Tiso_gene_11163

  • right end position:
    • 2110
  • transcription direction:
    • POSITIVE
  • left end position:
    • 541
  • centisome position:
    • 6.776901
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11163&oldid=40420"