Difference between revisions of "DHHB-METHYLTRANSFER-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-GENERIC-RXN ALCOHOL-DEHYDROG-GENERIC-RXN] == * direction: ** REVERSIBLE * common n...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHHB-METHYLTRANSFER-RXN DHHB-METHYLTRANSFER-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-GENERIC-RXN ALCOHOL-DEHYDROG-GENERIC-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHHB-METHYLTRANSFER-RXN DHHB-METHYLTRANSFER-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** 3-demethylubiquinone-9_3-methyltransferase
−
** ORF
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
+
** [http://enzyme.expasy.org/EC/2.1.1.64 EC-2.1.1.64]
 
* Synonym(s):
 
* Synonym(s):
 +
** 5-demethylubiquinone-8 methyltransferase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Primary-Alcohols]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[Aldehydes]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[OCTAPRENYL-METHYL-OH-METHOXY-BENZQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-9956]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a primary alcohol[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 an aldehyde[c] '''+''' 1 H+[c]
+
** 1 3-demethylubiquinol-8[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 ubiquinol-8[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5424]]
+
* Gene: [[Tiso_gene_6943]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_7649]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6562]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6563]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5425]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10739 10739]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28679 28679]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R07326 R07326]
+
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P04707 P04707]
+
** [http://www.uniprot.org/uniprot/P17993 P17993]
−
** [http://www.uniprot.org/uniprot/P21898 P21898]
+
** [http://www.uniprot.org/uniprot/Q9JWE6 Q9JWE6]
−
** [http://www.uniprot.org/uniprot/P07160 P07160]
+
** [http://www.uniprot.org/uniprot/Q9ZCT9 Q9ZCT9]
−
** [http://www.uniprot.org/uniprot/P07754 P07754]
+
** [http://www.uniprot.org/uniprot/P37431 P37431]
−
** [http://www.uniprot.org/uniprot/P06758 P06758]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P06757 P06757]
+
{{#set: common name=3-demethylubiquinone-9_3-methyltransferase}}
−
** [http://www.uniprot.org/uniprot/Q64564 Q64564]
+
{{#set: ec number=EC-2.1.1.64}}
−
** [http://www.uniprot.org/uniprot/P08843 P08843]
+
{{#set: common name=5-demethylubiquinone-8 methyltransferase}}
−
** [http://www.uniprot.org/uniprot/P14940 P14940]
+
{{#set: gene associated=Tiso_gene_6943}}
−
** [http://www.uniprot.org/uniprot/P19854 P19854]
+
{{#set: in pathway=PWY-6708|PWY-5870}}
−
** [http://www.uniprot.org/uniprot/P20368 P20368]
+
−
** [http://www.uniprot.org/uniprot/P19631 P19631]
+
−
** [http://www.uniprot.org/uniprot/P22797 P22797]
+
−
** [http://www.uniprot.org/uniprot/P22246 P22246]
+
−
** [http://www.uniprot.org/uniprot/Q05847 Q05847]
+
−
** [http://www.uniprot.org/uniprot/Q09009 Q09009]
+
−
** [http://www.uniprot.org/uniprot/Q03384 Q03384]
+
−
** [http://www.uniprot.org/uniprot/P26325 P26325]
+
−
** [http://www.uniprot.org/uniprot/P12311 P12311]
+
−
** [http://www.uniprot.org/uniprot/P39462 P39462]
+
−
** [http://www.uniprot.org/uniprot/P25988 P25988]
+
−
** [http://www.uniprot.org/uniprot/Q64673 Q64673]
+
−
** [http://www.uniprot.org/uniprot/P41680 P41680]
+
−
** [http://www.uniprot.org/uniprot/P33744 P33744]
+
−
** [http://www.uniprot.org/uniprot/P81431 P81431]
+
−
** [http://www.uniprot.org/uniprot/Q64437 Q64437]
+
−
** [http://www.uniprot.org/uniprot/P28474 P28474]
+
−
** [http://www.uniprot.org/uniprot/P17648 P17648]
+
−
** [http://www.uniprot.org/uniprot/Q7M1S7 Q7M1S7]
+
−
** [http://www.uniprot.org/uniprot/P23361 P23361]
+
−
** [http://www.uniprot.org/uniprot/P07161 P07161]
+
−
** [http://www.uniprot.org/uniprot/P33010 P33010]
+
−
** [http://www.uniprot.org/uniprot/P41681 P41681]
+
−
** [http://www.uniprot.org/uniprot/P23277 P23277]
+
−
** [http://www.uniprot.org/uniprot/Q09010 Q09010]
+
−
** [http://www.uniprot.org/uniprot/P23278 P23278]
+
−
** [http://www.uniprot.org/uniprot/P25437 P25437]
+
−
** [http://www.uniprot.org/uniprot/O06012 O06012]
+
−
** [http://www.uniprot.org/uniprot/P10127 P10127]
+
−
** [http://www.uniprot.org/uniprot/P00330 P00330]
+
−
** [http://www.uniprot.org/uniprot/P00331 P00331]
+
−
** [http://www.uniprot.org/uniprot/P23991 P23991]
+
−
** [http://www.uniprot.org/uniprot/P0A9Q7 P0A9Q7]
+
−
** [http://www.uniprot.org/uniprot/P00334 P00334]
+
−
** [http://www.uniprot.org/uniprot/P10807 P10807]
+
−
** [http://www.uniprot.org/uniprot/P00327 P00327]
+
−
** [http://www.uniprot.org/uniprot/P00328 P00328]
+
−
** [http://www.uniprot.org/uniprot/P28332 P28332]
+
−
** [http://www.uniprot.org/uniprot/P07327 P07327]
+
−
** [http://www.uniprot.org/uniprot/P00325 P00325]
+
−
** [http://www.uniprot.org/uniprot/P00326 P00326]
+
−
** [http://www.uniprot.org/uniprot/P08319 P08319]
+
−
** [http://www.uniprot.org/uniprot/P40394 P40394]
+
−
** [http://www.uniprot.org/uniprot/P11766 P11766]
+
−
** [http://www.uniprot.org/uniprot/P14219 P14219]
+
−
** [http://www.uniprot.org/uniprot/P13603 P13603]
+
−
** [http://www.uniprot.org/uniprot/P00329 P00329]
+
−
** [http://www.uniprot.org/uniprot/P06525 P06525]
+
−
** [http://www.uniprot.org/uniprot/P25141 P25141]
+
−
** [http://www.uniprot.org/uniprot/P14675 P14675]
+
−
** [http://www.uniprot.org/uniprot/P14674 P14674]
+
−
** [http://www.uniprot.org/uniprot/P14673 P14673]
+
−
** [http://www.uniprot.org/uniprot/P12711 P12711]
+
−
** [http://www.uniprot.org/uniprot/P18332 P18332]
+
−
** [http://www.uniprot.org/uniprot/P00332 P00332]
+
−
** [http://www.uniprot.org/uniprot/P22245 P22245]
+
−
** [http://www.uniprot.org/uniprot/P77316 P77316]
+
−
** [http://www.uniprot.org/uniprot/Q9JRB0 Q9JRB0]
+
−
** [http://www.uniprot.org/uniprot/Q9CEN0 Q9CEN0]
+
−
** [http://www.uniprot.org/uniprot/P44557 P44557]
+
−
** [http://www.uniprot.org/uniprot/Q9K0P0 Q9K0P0]
+
−
** [http://www.uniprot.org/uniprot/Q9JVR8 Q9JVR8]
+
−
** [http://www.uniprot.org/uniprot/P28469 P28469]
+
−
** [http://www.uniprot.org/uniprot/Q64533 Q64533]
+
−
** [http://www.uniprot.org/uniprot/Q64415 Q64415]
+
−
** [http://www.uniprot.org/uniprot/Q40249 Q40249]
+
−
** [http://www.uniprot.org/uniprot/P79896 P79896]
+
−
** [http://www.uniprot.org/uniprot/Q06099 Q06099]
+
−
** [http://www.uniprot.org/uniprot/Q07588 Q07588]
+
−
** [http://www.uniprot.org/uniprot/P51635 P51635]
+
−
** [http://www.uniprot.org/uniprot/P20306 P20306]
+
−
** [http://www.uniprot.org/uniprot/Q7M4Z9 Q7M4Z9]
+
−
** [http://www.uniprot.org/uniprot/P12886 P12886]
+
−
** [http://www.uniprot.org/uniprot/P05336 P05336]
+
−
** [http://www.uniprot.org/uniprot/P09369 P09369]
+
−
** [http://www.uniprot.org/uniprot/P09370 P09370]
+
−
** [http://www.uniprot.org/uniprot/P10847 P10847]
+
−
** [http://www.uniprot.org/uniprot/P10848 P10848]
+
−
** [http://www.uniprot.org/uniprot/P00333 P00333]
+
−
** [http://www.uniprot.org/uniprot/Q43264 Q43264]
+
−
** [http://www.uniprot.org/uniprot/P12854 P12854]
+
−
** [http://www.uniprot.org/uniprot/Q6LCE4 Q6LCE4]
+
−
** [http://www.uniprot.org/uniprot/P84328 P84328]
+
−
** [http://www.uniprot.org/uniprot/Q9GN94 Q9GN94]
+
−
** [http://www.uniprot.org/uniprot/P20369 P20369]
+
−
** [http://www.uniprot.org/uniprot/P07162 P07162]
+
−
** [http://www.uniprot.org/uniprot/P07159 P07159]
+
−
** [http://www.uniprot.org/uniprot/P23237 P23237]
+
−
** [http://www.uniprot.org/uniprot/P23236 P23236]
+
−
** [http://www.uniprot.org/uniprot/P25139 P25139]
+
−
** [http://www.uniprot.org/uniprot/P49384 P49384]
+
−
** [http://www.uniprot.org/uniprot/Q24641 Q24641]
+
−
** [http://www.uniprot.org/uniprot/P26719 P26719]
+
−
** [http://www.uniprot.org/uniprot/P30350 P30350]
+
−
** [http://www.uniprot.org/uniprot/P49383 P49383]
+
−
** [http://www.uniprot.org/uniprot/P37473 P37473]
+
−
** [http://www.uniprot.org/uniprot/Q27595 Q27595]
+
−
** [http://www.uniprot.org/uniprot/Q03505 Q03505]
+
−
** [http://www.uniprot.org/uniprot/P32771 P32771]
+
−
** [http://www.uniprot.org/uniprot/Q07288 Q07288]
+
−
** [http://www.uniprot.org/uniprot/P42328 P42328]
+
−
** [http://www.uniprot.org/uniprot/P38113 P38113]
+
−
** [http://www.uniprot.org/uniprot/P48815 P48815]
+
−
** [http://www.uniprot.org/uniprot/P42327 P42327]
+
−
** [http://www.uniprot.org/uniprot/P37686 P37686]
+
−
** [http://www.uniprot.org/uniprot/P80338 P80338]
+
−
** [http://www.uniprot.org/uniprot/P50381 P50381]
+
−
** [http://www.uniprot.org/uniprot/P80360 P80360]
+
−
** [http://www.uniprot.org/uniprot/P46415 P46415]
+
−
** [http://www.uniprot.org/uniprot/P28032 P28032]
+
−
** [http://www.uniprot.org/uniprot/Q41241 Q41241]
+
−
** [http://www.uniprot.org/uniprot/Q41242 Q41242]
+
−
** [http://www.uniprot.org/uniprot/P43067 P43067]
+
−
** [http://www.uniprot.org/uniprot/Q07321 Q07321]
+
−
** [http://www.uniprot.org/uniprot/Q43016 Q43016]
+
−
** [http://www.uniprot.org/uniprot/P07246 P07246]
+
−
** [http://www.uniprot.org/uniprot/Q09669 Q09669]
+
−
** [http://www.uniprot.org/uniprot/Q59399 Q59399]
+
−
** [http://www.uniprot.org/uniprot/P48977 P48977]
+
−
** [http://www.uniprot.org/uniprot/Q42953 Q42953]
+
−
** [http://www.uniprot.org/uniprot/P25405 P25405]
+
−
** [http://www.uniprot.org/uniprot/P25406 P25406]
+
−
** [http://www.uniprot.org/uniprot/P80512 P80512]
+
−
** [http://www.uniprot.org/uniprot/P54202 P54202]
+
−
** [http://www.uniprot.org/uniprot/Q7LZI0 Q7LZI0]
+
−
** [http://www.uniprot.org/uniprot/P49645 P49645]
+
−
** [http://www.uniprot.org/uniprot/Q64563 Q64563]
+
−
** [http://www.uniprot.org/uniprot/P80467 P80467]
+
−
** [http://www.uniprot.org/uniprot/Q96533 Q96533]
+
−
** [http://www.uniprot.org/uniprot/Q26653 Q26653]
+
−
** [http://www.uniprot.org/uniprot/Q42764 Q42764]
+
−
** [http://www.uniprot.org/uniprot/Q39782 Q39782]
+
−
** [http://www.uniprot.org/uniprot/Q39783 Q39783]
+
−
** [http://www.uniprot.org/uniprot/Q42765 Q42765]
+
−
** [http://www.uniprot.org/uniprot/Q7LZ46 Q7LZ46]
+
−
** [http://www.uniprot.org/uniprot/P73138 P73138]
+
−
** [http://www.uniprot.org/uniprot/Q41767 Q41767]
+
−
** [http://www.uniprot.org/uniprot/Q43169 Q43169]
+
−
** [http://www.uniprot.org/uniprot/O49054 O49054]
+
−
** [http://www.uniprot.org/uniprot/O49061 O49061]
+
−
** [http://www.uniprot.org/uniprot/O49053 O49053]
+
−
** [http://www.uniprot.org/uniprot/O49058 O49058]
+
−
** [http://www.uniprot.org/uniprot/O82791 O82791]
+
−
** [http://www.uniprot.org/uniprot/O94038 O94038]
+
−
** [http://www.uniprot.org/uniprot/O45687 O45687]
+
−
** [http://www.uniprot.org/uniprot/Q17334 Q17334]
+
−
** [http://www.uniprot.org/uniprot/Q9UAT1 Q9UAT1]
+
−
** [http://www.uniprot.org/uniprot/Q9RI47 Q9RI47]
+
−
** [http://www.uniprot.org/uniprot/P78870 P78870]
+
−
** [http://www.uniprot.org/uniprot/O74540 O74540]
+
−
** [http://www.uniprot.org/uniprot/O65459 O65459]
+
−
** [http://www.uniprot.org/uniprot/Q9P6C8 Q9P6C8]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=polyketide_synthase}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-1.1.1.1}}
+
−
{{#set: gene associated=Tiso_gene_5424|Tiso_gene_7649|Tiso_gene_6562|Tiso_gene_6563|Tiso_gene_5425}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 19:24, 21 March 2018

Reaction DHHB-METHYLTRANSFER-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-demethylubiquinone-9_3-methyltransferase
  • ec number:
  • Synonym(s):
    • 5-demethylubiquinone-8 methyltransferase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6708, ubiquinol-8 biosynthesis (prokaryotic): PWY-6708
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5870, ubiquinol-8 biosynthesis (eukaryotic): PWY-5870
    • 3 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DHHB-METHYLTRANSFER-RXN&oldid=41416"