Difference between revisions of "Tiso gene 10066"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14125 RXN-14125] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_10066 == * right end position: ** 1714 * transcription direction: ** POSITIVE * left end position: ** 496 * centisome position: ** 2.521478...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14125 RXN-14125] ==
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== Gene Tiso_gene_10066 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1714
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.2.3 EC-4.2.3]
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** POSITIVE
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* left end position:
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** 496
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* centisome position:
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** 2.5214784   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.11.1.15-RXN]]
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** 1 [[4-PHOSPHONOOXY-THREONINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2189]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 4-phospho-hydroxy-L-threonine[c] '''+''' 1 H2O[c] '''=>''' 1 4-hydroxy-L-threonine[c] '''+''' 1 phosphate[c]
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* Reaction: [[3-OXOADIPATE-ENOL-LACTONASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[3.1.1.64-RXN]]
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* [[Tiso_gene_12871]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[athaliana]]
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*** Assignment: ec-number
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* [[Tiso_gene_419]]
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways ==
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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* [[orthology]]:
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]:
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*** Assignment: ec-number
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*** [[athaliana]]
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* Reaction: [[RXN-10083]]
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*** [[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10711]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10767]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12252]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12575]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-5468]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXNQT-4366]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY]]
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* [[CATECHOL-ORTHO-CLEAVAGE-PWY]]
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* [[PWY-6185]]
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* [[PWY-6857]]
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* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1714}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30662 30662]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=496}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05086 R05086]
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{{#set: centisome position=2.5214784    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=1.11.1.15-RXN|3-OXOADIPATE-ENOL-LACTONASE-RXN|3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10083|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXN0-5468|RXNQT-4366}}
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{{#set: ec number=EC-4.2.3}}
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{{#set: pathway associated=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY|CATECHOL-ORTHO-CLEAVAGE-PWY|PWY-6185|PWY-6857|PWY-6303}}
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{{#set: gene associated=Tiso_gene_12871|Tiso_gene_419}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Latest revision as of 19:25, 21 March 2018

Gene Tiso_gene_10066

  • right end position:
    • 1714
  • transcription direction:
    • POSITIVE
  • left end position:
    • 496
  • centisome position:
    • 2.5214784
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10066&oldid=41460"