Difference between revisions of "RXN-12710"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1441 RXN0-1441] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12710 RXN-12710] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1441 RXN0-1441] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12710 RXN-12710] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** acetyl-_c-acetyltransferase
 +
** 3-ketoacyl-_thiolase
 +
** thiolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.1.53 EC-3.6.1.53]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
−
** [http://enzyme.expasy.org/EC/3.6.1.13 EC-3.6.1.13]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ADENOSINE_DIPHOSPHATE_RIBOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-15317]][c] '''+''' 1 [[AMP]][c] '''+''' 2 [[PROTON]][c]
+
** 1 [[CPD-13699]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-13700]][c] '''+''' 1 [[ACETYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ADP-D-ribose[c] '''+''' 1 H2O[c] '''=>''' 1 D-ribofuranose 5-phosphate[c] '''+''' 1 AMP[c] '''+''' 2 H+[c]
+
** 1 3,22-dioxochol-4-en-24-oyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 3-oxo-4-pregnene-20-carboxyl-CoA[c] '''+''' 1 acetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7189]]
+
* Gene: [[Tiso_gene_17451]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_17632]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_15496]]
+
* Gene: [[Tiso_gene_15327]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_17630]]
+
* Gene: [[Tiso_gene_3855]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_9180]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_2747]]
+
* Gene: [[Tiso_gene_3856]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10116]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6948]], sitosterol degradation to androstenedione: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6948 PWY-6948]
 +
** '''2''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-6946]], cholesterol degradation to androstenedione II (cholesterol dehydrogenase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6946 PWY-6946]
 +
** '''3''' reactions found over '''22''' reactions in the full pathway
 +
* [[PWY-6945]], cholesterol degradation to androstenedione I (cholesterol oxidase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6945 PWY-6945]
 +
** '''2''' reactions found over '''17''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
*** [[athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[annotation]]:
+
*** Tool: [[pathwaytools]]
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10412 10412]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01054 R01054]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=acetyl-_c-acetyltransferase}}
−
{{#set: ec number=EC-3.6.1.53}}
+
{{#set: common name=3-ketoacyl-_thiolase}}
−
{{#set: ec number=EC-3.6.1.13}}
+
{{#set: common name=thiolase}}
−
{{#set: gene associated=Tiso_gene_7189|Tiso_gene_17632|Tiso_gene_15496|Tiso_gene_17630|Tiso_gene_9180|Tiso_gene_2747}}
+
{{#set: ec number=EC-2.3.1.16}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_17451|Tiso_gene_15327|Tiso_gene_3855|Tiso_gene_3856|Tiso_gene_10116}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-6948|PWY-6946|PWY-6945}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus|athaliana}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:26, 21 March 2018

Reaction RXN-12710

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
    • thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3,22-dioxochol-4-en-24-oyl-CoA[c] + 1 coenzyme A[c] => 1 3-oxo-4-pregnene-20-carboxyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6948, sitosterol degradation to androstenedione: PWY-6948
    • 2 reactions found over 18 reactions in the full pathway
  • PWY-6946, cholesterol degradation to androstenedione II (cholesterol dehydrogenase): PWY-6946
    • 3 reactions found over 22 reactions in the full pathway
  • PWY-6945, cholesterol degradation to androstenedione I (cholesterol oxidase): PWY-6945
    • 2 reactions found over 17 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12710&oldid=41569"