Difference between revisions of "RXN0-1441"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6002 RXN-6002] == * direction: ** LEFT-TO-RIGHT * common name: ** aldehyde_dehydrogenase * ec n...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1441 RXN0-1441] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1441 RXN0-1441] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** ORF |
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.6.1.53 EC-3.6.1.53] |
| + | ** [http://enzyme.expasy.org/EC/3.6.1.13 EC-3.6.1.13] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[ADENOSINE_DIPHOSPHATE_RIBOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-15317]][c] '''+''' 1 [[AMP]][c] '''+''' 2 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 ADP-D-ribose[c] '''+''' 1 H2O[c] '''=>''' 1 D-ribofuranose 5-phosphate[c] '''+''' 1 AMP[c] '''+''' 2 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_17630]] |
| − | ** | + | ** Source: [[orthology-esiliculosus]] |
| − | ***EC-NUMBER | + | * Gene: [[Tiso_gene_7189]] |
| − | ** [[ | + | ** Source: [[annotation-experimental_annotation]] |
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_9180]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_15496]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_2747]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_17632]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-athaliana]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| − | * [[annotation]]: | + | ** Source: [[orthology-esiliculosus]] |
| − | ** [[pathwaytools]]: | + | *** Tool: [[pantograph]] |
| − | *** [[ | + | * Category: [[annotation]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10412 10412] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01054 R01054] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=ORF}} |
| − | {{#set: ec number=EC- | + | {{#set: ec number=EC-3.6.1.53}} |
| − | {{#set: | + | {{#set: ec number=EC-3.6.1.13}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_17630|Tiso_gene_7189|Tiso_gene_9180|Tiso_gene_15496|Tiso_gene_2747|Tiso_gene_17632}} |
| − | {{#set: | + | {{#set: in pathway=}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction source=esiliculosus | + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}} |
| − | + | {{#set: reconstruction tool=pantograph|pathwaytools}} | |
| − | {{#set: reconstruction tool=pathwaytools | + | |
| − | + | ||
Latest revision as of 19:26, 21 March 2018
Contents
Reaction RXN0-1441
- direction:
- LEFT-TO-RIGHT
- common name:
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ADENOSINE_DIPHOSPHATE_RIBOSE[c] + 1 WATER[c] => 1 CPD-15317[c] + 1 AMP[c] + 2 PROTON[c]
- With common name(s):
- 1 ADP-D-ribose[c] + 1 H2O[c] => 1 D-ribofuranose 5-phosphate[c] + 1 AMP[c] + 2 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_17630
- Source: orthology-esiliculosus
- Gene: Tiso_gene_7189
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_9180
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Gene: Tiso_gene_15496
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_2747
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_17632
- Source: orthology-esiliculosus
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
