Difference between revisions of "PWY-6328"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6328 PWY-6328] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-12...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6328 PWY-6328] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* common name:
 
* common name:
** ORF
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** L-lysine degradation X
* ec number:
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** [http://enzyme.expasy.org/EC/3.5.4.3 EC-3.5.4.3]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''6''' reactions in the full pathway
** 1 [[GUANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[XANTHINE]][c] '''+''' 1 [[AMMONIUM]][c]
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* [[LYSDECARBOX-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 guanine[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''=>''' 1 xanthine[c] '''+''' 1 ammonium[c]
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*** [[Tiso_gene_10395]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[orthology-synechocystis]]
Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
* [[Tiso_gene_12280]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10853 RXN-10853]
** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10854 RXN-10854]
***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14724 RXN-14724]
** [[pantograph]]-[[creinhardtii]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8182 RXN-8182]
== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=VAGL-RXN VAGL-RXN]
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
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** '''4''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
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** '''7''' reactions found over '''24''' reactions in the full pathway
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* [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-1224}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14665 14665]
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{{#set: common name=L-lysine degradation X}}
* LIGAND-RXN:
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{{#set: reaction found=1}}
** [http://www.genome.jp/dbget-bin/www_bget?R01676 R01676]
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{{#set: total reaction=6}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=17.0}}
{{#set: common name=ORF}}
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{{#set: ec number=EC-3.5.4.3}}
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{{#set: gene associated=Tiso_gene_12280}}
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{{#set: in pathway=P164-PWY|PWY-6608|PWY-5497|PWY-6606}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:27, 21 March 2018

Pathway PWY-6328

  • taxonomic range:
  • common name:
    • L-lysine degradation X
  • Synonym(s):

Reaction(s) found

1 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links