Difference between revisions of "Tiso gene 5435"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-820 RXN1G-820] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-delta2-cis,cis-delta1...")
(Created page with "Category:Gene == Gene Tiso_gene_5435 == * right end position: ** 13467 * transcription direction: ** NEGATIVE * left end position: ** 3980 * centisome position: ** 29.5383...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-820 RXN1G-820] ==
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== Gene Tiso_gene_5435 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 13467
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* common name:
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* transcription direction:
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** trans-delta2-cis,cis-delta17,29-C48:3-[acyl-carrier protein] reductase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.3.1.M4 EC-1.3.1.M4]
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** 3980
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* centisome position:
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** 29.538368   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CATAL-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[trans-D2-cis-cis-D17-29-C48-3-ACPs]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[cis-cis-D17-29-C48-2-ACPs]][c] '''+''' 1 [[NAD]][c]
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** Source: [[orthology-synechocystis]]
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* With common name(s):
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* Reaction: [[CYTOCHROME-C-PEROXIDASE-RXN]]
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** 1 H+[c] '''+''' 1 a trans-delta2-cis,cis-delta17,29-C48:3-[acp][c] '''+''' 1 NADH[c] '''=>''' 1 a cis,cis-delta17,29-C48:2-[acp][c] '''+''' 1 NAD+[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_10778]]
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* Reaction: [[RXN-12440]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** Assignment: automated-name-match
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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* Reaction: [[RXN-3521]]
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** '''86''' reactions found over '''182''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: automated-name-match
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* [[orthology]]:
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== Pathways associated ==
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** [[pantograph]]:
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* [[PWY-6960]]
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*** [[esiliculosus]]
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* [[DETOX1-PWY-1]]
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* [[DETOX1-PWY]]
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* [[PWY-5506]]
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* [[PWY-6959]]
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* [[PWY-6961]]
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* [[PWY-2261]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=13467}}
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{{#set: common name=trans-delta2-cis,cis-delta17,29-C48:3-[acyl-carrier protein] reductase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-1.3.1.M4}}
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{{#set: left end position=3980}}
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{{#set: gene associated=Tiso_gene_10778}}
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{{#set: centisome position=29.538368    }}
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{{#set: in pathway=PWYG-321}}
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{{#set: reaction associated=CATAL-RXN|CYTOCHROME-C-PEROXIDASE-RXN|RXN-12440|RXN-3521}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-6960|DETOX1-PWY-1|DETOX1-PWY|PWY-5506|PWY-6959|PWY-6961|PWY-2261}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 19:27, 21 March 2018

Gene Tiso_gene_5435

  • right end position:
    • 13467
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3980
  • centisome position:
    • 29.538368
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5435&oldid=41701"