Difference between revisions of "PWY-1121"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UMPP UMPP] == * direction: ** LEFT-TO-RIGHT * common name: ** Uridine 5'-monophosphate phosphohydro...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58023 TAX-5...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UMPP UMPP] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58023 TAX-58023]
 
* common name:
 
* common name:
−
** Uridine 5'-monophosphate phosphohydrolase
+
** suberin monomers biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''9''' reactions found over '''19''' reactions in the full pathway
−
** 1.0 [[WATER]][c] '''+''' 1.0 [[UMP]][c] '''=>''' 1.0 [[Pi]][c] '''+''' 1.0 [[URIDINE]][c]
+
* [[6.2.1.34-RXN]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1.0 H2O[c] '''+''' 1.0 UMP[c] '''=>''' 1.0 phosphate[c] '''+''' 1.0 uridine[c]
+
*** [[Tiso_gene_12275]]
−
 
+
*** [[Tiso_gene_14183]]
−
== Genes associated with this reaction  ==
+
** 2 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-athaliana]]
−
* [[Tiso_gene_9166]]
+
*** [[orthology-esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
+
* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
−
* [[Tiso_gene_6988]]
+
** 2 associated gene(s):
−
** [[pantograph]]-[[creinhardtii]]
+
*** [[Tiso_gene_10561]]
−
== Pathways  ==
+
*** [[Tiso_gene_14561]]
−
== Reconstruction information  ==
+
** 2 reconstruction source(s) associated:
−
* [[orthology]]:
+
*** [[orthology-athaliana]]
−
** [[pantograph]]:
+
*** [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
* [[PALMITOYL-COA-HYDROLASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_801]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-creinhardtii]]
 +
* [[RXN-1104]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_18971]]
 +
*** [[Tiso_gene_18257]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-1126]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_14183]]
 +
*** [[Tiso_gene_12275]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-16389]]
 +
** 9 associated gene(s):
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_9394]]
 +
*** [[Tiso_gene_4191]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_7855]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_348]]
 +
*** [[Tiso_gene_13394]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-16418]]
 +
** 9 associated gene(s):
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_7855]]
 +
*** [[Tiso_gene_9394]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_348]]
 +
*** [[Tiso_gene_4191]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-9666]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_7477]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_1547]]
 +
*** [[Tiso_gene_8263]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-AMMONIA-LYASE-RXN PHENYLALANINE-AMMONIA-LYASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1103 RXN-1103]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12155 RXN-12155]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12156 RXN-12156]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12157 RXN-12157]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16398 RXN-16398]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16400 RXN-16400]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16416 RXN-16416]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16417 RXN-16417]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=TYRAMINE-N-FERULOYLTRANSFERASE-RXN TYRAMINE-N-FERULOYLTRANSFERASE-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* ARACYC:
−
{{#set: common name=Uridine 5'-monophosphate phosphohydrolase}}
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-1121 PWY-1121]
−
{{#set: gene associated=Tiso_gene_9166|Tiso_gene_6988}}
+
{{#set: taxonomic range=TAX-58023}}
−
{{#set: in pathway=}}
+
{{#set: common name=suberin monomers biosynthesis}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reaction found=9}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: total reaction=19}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: completion rate=47.0}}

Latest revision as of 19:28, 21 March 2018

Pathway PWY-1121

  • taxonomic range:
  • common name:
    • suberin monomers biosynthesis
  • Synonym(s):

Reaction(s) found

9 reactions found over 19 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-1121&oldid=41775"