Difference between revisions of "GUANIDINOBUTYRASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11065 RXN-11065] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-lactamase * ec number:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANIDINOBUTYRASE-RXN GUANIDINOBUTYRASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11065 RXN-11065] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANIDINOBUTYRASE-RXN GUANIDINOBUTYRASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** beta-lactamase
 
 
* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4]
+
** [http://enzyme.expasy.org/EC/3.5.3.7 EC-3.5.3.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 3 [[WATER]][c] '''+''' 2 [[CPD-12259]][c] '''=>''' 4 [[D-ALANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-12230]][c] '''+''' 1 [[UNDECAPRENYL-DIPHOSPHATE]][c]
+
** 1 [[CPD-592]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[UREA]][c] '''+''' 1 [[4-AMINO-BUTYRATE]][c]
 
* With common name(s):
 
* With common name(s):
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** 3 H2O[c] '''+''' 2 a peptidoglycan dimer (S. aureus)[c] '''=>''' 4 D-alanine[c] '''+''' 1 H+[c] '''+''' 1 a peptidoglycan with D,D cross-link (S. aureus)[c] '''+''' 1 di-trans,octa-cis-undecaprenyl diphosphate[c]
+
** 1 4-guanidinobutanoate[c] '''+''' 1 H2O[c] '''=>''' 1 urea[c] '''+''' 1 4-aminobutanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18870]]
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* Gene: [[Tiso_gene_4415]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-synechocystis]]
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***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5265]], peptidoglycan biosynthesis II (staphylococci): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5265 PWY-5265]
+
* [[PWY-7523]], L-arginine degradation XII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7523 PWY-7523]
−
** '''3''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5742]], L-arginine degradation IX (arginine:pyruvate transaminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5742 PWY-5742]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARGDEG-V-PWY]], L-arginine degradation X (arginine monooxygenase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-V-PWY ARGDEG-V-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[ARGDEG-IV-PWY]], L-arginine degradation VIII (arginine oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-IV-PWY ARGDEG-IV-PWY]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-synechocystis]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19501 19501]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01990 R01990]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=beta-lactamase}}
+
{{#set: ec number=EC-3.5.3.7}}
−
{{#set: ec number=EC-3.4.16.4}}
+
{{#set: gene associated=Tiso_gene_4415}}
−
{{#set: gene associated=Tiso_gene_18870}}
+
{{#set: in pathway=PWY-7523|PWY-5742|ARGDEG-V-PWY|ARGDEG-IV-PWY}}
−
{{#set: in pathway=PWY-5265}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-synechocystis}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:15, 21 March 2018

Reaction GUANIDINOBUTYRASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-guanidinobutanoate[c] + 1 H2O[c] => 1 urea[c] + 1 4-aminobutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7523, L-arginine degradation XII: PWY-7523
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5742, L-arginine degradation IX (arginine:pyruvate transaminase pathway): PWY-5742
    • 1 reactions found over 4 reactions in the full pathway
  • ARGDEG-V-PWY, L-arginine degradation X (arginine monooxygenase pathway): ARGDEG-V-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • ARGDEG-IV-PWY, L-arginine degradation VIII (arginine oxidase pathway): ARGDEG-IV-PWY
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GUANIDINOBUTYRASE-RXN&oldid=40462"