Difference between revisions of "Tiso gene 15139"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.160-RXN 2.7.1.160-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Putative tRNA 2'-ph...")
(Created page with "Category:Gene == Gene Tiso_gene_15139 == * right end position: ** 3944 * transcription direction: ** NEGATIVE * left end position: ** 2339 * centisome position: ** 44.9030...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.160-RXN 2.7.1.160-RXN] ==
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== Gene Tiso_gene_15139 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3944
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* common name:
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* transcription direction:
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** Putative tRNA 2'-phosphotransferase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.7.1.160 EC-2.7.1.160]
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** 2339
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* centisome position:
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** 44.903053   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[G6PI]]
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** 1 [[2-phospho-ligated-tRNA]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[Spliced-tRNA-precursor]][c] '''+''' 1 [[CPD-9007]][c] '''+''' 1 [[NIACINAMIDE]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN]]
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** 1 a 2'-phospho-[ligated tRNA][c] '''+''' 1 NAD+[c] '''=>''' 1 a spliced tRNA[c] '''+''' 1 ADP ribose 1'',2''-cyclic phosphate[c] '''+''' 1 nicotinamide[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_17372]]
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** Source: [[orthology-creinhardtii]]
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** EXPERIMENTAL_ANNOTATION
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== Pathways associated ==
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6689]], tRNA splicing I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3944}}
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{{#set: common name=Putative tRNA 2'-phosphotransferase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-2.7.1.160}}
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{{#set: left end position=2339}}
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{{#set: gene associated=Tiso_gene_17372}}
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{{#set: centisome position=44.903053    }}
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{{#set: in pathway=PWY-6689}}
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{{#set: reaction associated=G6PI|GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Latest revision as of 19:29, 21 March 2018

Gene Tiso_gene_15139

  • right end position:
    • 3944
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2339
  • centisome position:
    • 44.903053
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15139&oldid=41931"