Difference between revisions of "PWY66-389"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamine_amido...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-389 PWY66-389] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-389 PWY66-389] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
 
* common name:
 
* common name:
** glutamine_amidotransferase
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** phytol degradation
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
** 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[GMP]][c] '''+''' 2 [[PROTON]][c]
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* [[RXN66-478]]
* With common name(s):
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** 5 associated gene(s):
** 1 XMP[c] '''+''' 1 ammonium[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 GMP[c] '''+''' 2 H+[c]
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*** [[Tiso_gene_7649]]
 
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*** [[Tiso_gene_6563]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_6562]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_5425]]
* [[Tiso_gene_6657]]
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*** [[Tiso_gene_5424]]
** IN-SILICO_ANNOTATION
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** 1 reconstruction source(s) associated:
***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
** EXPERIMENTAL_ANNOTATION
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* [[RXN66-479]]
***EC-NUMBER
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** 0 associated gene:
** [[pantograph]]-[[athaliana]]
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** 1 reconstruction source(s) associated:
** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
** [[pantograph]]-[[creinhardtii]]
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* [[RXN66-480]]
** [[pantograph]]-[[creinhardtii]]
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** 9 associated gene(s):
** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_348]]
== Pathways  ==
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*** [[Tiso_gene_13394]]
== Reconstruction information  ==
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*** [[Tiso_gene_135]]
* [[orthology]]:
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*** [[Tiso_gene_136]]
** [[pantograph]]:
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*** [[Tiso_gene_500]]
*** [[creinhardtii]]
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*** [[Tiso_gene_7855]]
*** [[esiliculosus]]
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*** [[Tiso_gene_4191]]
*** [[athaliana]]
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*** [[Tiso_gene_10876]]
* [[annotation]]:
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*** [[Tiso_gene_9394]]
** [[pathwaytools]]:
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** 3 reconstruction source(s) associated:
*** [[experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
*** [[in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[RXN66-482]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_10337]]
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*** [[Tiso_gene_18040]]
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*** [[Tiso_gene_18041]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-40674}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18301 18301]
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{{#set: common name=phytol degradation}}
* LIGAND-RXN:
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{{#set: reaction found=4}}
** [http://www.genome.jp/dbget-bin/www_bget?R01230 R01230]
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{{#set: total reaction=4}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=100.0}}
{{#set: common name=glutamine_amidotransferase}}
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{{#set: gene associated=Tiso_gene_6657}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:30, 21 March 2018

Pathway PWY66-389

  • taxonomic range:
  • common name:
    • phytol degradation
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links