Difference between revisions of "R313-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY] == * taxonomic range: ** [http...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R313-RXN R313-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_nitrile_hydratase *...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R313-RXN R313-RXN] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** protocatechuate degradation II (ortho-cleavage pathway)
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** probable_nitrile_hydratase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.84 EC-4.2.1.84]
 
* Synonym(s):
 
* Synonym(s):
** protocatechuate branch of the 3-oxoadipate pathway
 
** protocatechuate branch of the 3-ketoadipate pathway
 
** protocatechuate branch of the β-ketoadipate pathway
 
** protocatechuate degradation via ortho-cleavage
 
** protocatechuate degradation via the β-ketoadipate pathway
 
** protocatechuate 3,4-cleavage
 
  
== Reaction(s) found ==
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== Reaction Formula ==
* '''1''' reaction(s) found
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* With identifiers:
** [[3-OXOADIPATE-ENOL-LACTONASE-RXN]]
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** 1 [[3-CYANOPYRIDINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NIACINAMIDE]][c]
== Reaction(s) not found ==
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* With common name(s):
* '''3''' reaction(s) not found
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** 1 3-cyanopyridine[c] '''+''' 1 H2O[c] '''=>''' 1 nicotinamide[c]
** [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-34-DIOXYGENASE-RXN PROTOCATECHUATE-34-DIOXYGENASE-RXN]
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** [http://metacyc.org/META/NEW-IMAGE?object=4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN 4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN]
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== Genes associated with this reaction ==
** [http://metacyc.org/META/NEW-IMAGE?object=5.5.1.2-RXN 5.5.1.2-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_4032]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[P345-PWY]], aldoxime degradation: [http://metacyc.org/META/NEW-IMAGE?object=P345-PWY P345-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=protocatechuate degradation II (ortho-cleavage pathway)}}
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{{#set: common name=probable_nitrile_hydratase}}
{{#set: common name=protocatechuate branch of the 3-oxoadipate pathway|protocatechuate branch of the 3-ketoadipate pathway|protocatechuate branch of the β-ketoadipate pathway|protocatechuate degradation via ortho-cleavage|protocatechuate degradation via the β-ketoadipate pathway|protocatechuate 3,4-cleavage}}
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{{#set: ec number=EC-4.2.1.84}}
{{#set: reaction found=1}}
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{{#set: gene associated=Tiso_gene_4032}}
{{#set: reaction not found=3}}
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{{#set: in pathway=P345-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:31, 21 March 2018

Reaction R313-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • probable_nitrile_hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P345-PWY, aldoxime degradation: P345-PWY
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links