Difference between revisions of "PHOSPHORIBOSYL-ATP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE-DEHYDROGENASE-RXN SARCOSINE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-ATP PHOSPHORIBOSYL-ATP] == * smiles: ** C(C4(C(C(C(N3(C(C2(=C(N(C1(C(C(C(O1)COP(...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE-DEHYDROGENASE-RXN SARCOSINE-DEHYDROGENASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-ATP PHOSPHORIBOSYL-ATP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(C4(C(C(C(N3(C(C2(=C(N(C1(C(C(C(O1)COP(OP(=O)([O-])OP(=O)([O-])O)(=O)[O-])O)O))C=N2)N=C3))=N))O4)O)O))OP([O-])([O-])=O
 
* common name:
 
* common name:
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** sarcosine_dehydrogenase
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** 1-(5-phospho-β-D-ribosyl)-ATP
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/1.5.8.3 EC-1.5.8.3]
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** InChIKey=RKNHJBVBFHDXGR-KEOHHSTQSA-I
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* molecular weight:
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** 714.24   
 
* Synonym(s):
 
* Synonym(s):
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** 1-(5-phosphoribosyl)-ATP
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** N1-(5-phospho-D-ribosyl)-ATP
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** 5-phosphoribosyl-ATP
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** 1-(5-phospho-D-ribosyl)-ATP
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** phosphoribosyl-ATP
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[HISTPRATPHYD-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[SARCOSINE]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[ETF-Reduced]][c]
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* [[PRADP]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 H+[c] '''+''' 1 sarcosine[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H2O[c] '''=>''' 1 formaldehyde[c] '''+''' 1 glycine[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
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== Reaction(s) of unknown directionality ==
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* [[ATPPHOSPHORIBOSYLTRANS-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14788]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-4722]], creatinine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4722 PWY-4722]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[CRNFORCAT-PWY]], creatinine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CRNFORCAT-PWY CRNFORCAT-PWY]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* DRUGBANK : DB01661
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19793 19793]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90658853 90658853]
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** [http://www.genome.jp/dbget-bin/www_bget?R00611 R00611]
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* HMDB : HMDB03665
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=sarcosine_dehydrogenase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C02739 C02739]
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{{#set: ec number=EC-1.5.8.3}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_14788}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=73200 73200]
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{{#set: in pathway=PWY-4722|CRNFORCAT-PWY}}
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* BIGG : prbatp
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{{#set: reconstruction category=annotation}}
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{{#set: smiles=C(C4(C(C(C(N3(C(C2(=C(N(C1(C(C(C(O1)COP(OP(=O)([O-])OP(=O)([O-])O)(=O)[O-])O)O))C=N2)N=C3))=N))O4)O)O))OP([O-])([O-])=O}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=1-(5-phospho-β-D-ribosyl)-ATP}}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: inchi key=InChIKey=RKNHJBVBFHDXGR-KEOHHSTQSA-I}}
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{{#set: molecular weight=714.24    }}
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{{#set: common name=1-(5-phosphoribosyl)-ATP|N1-(5-phospho-D-ribosyl)-ATP|5-phosphoribosyl-ATP|1-(5-phospho-D-ribosyl)-ATP|phosphoribosyl-ATP}}
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{{#set: consumed by=HISTPRATPHYD-RXN|PRADP}}
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{{#set: reversible reaction associated=ATPPHOSPHORIBOSYLTRANS-RXN}}

Latest revision as of 19:32, 21 March 2018

Metabolite PHOSPHORIBOSYL-ATP

  • smiles:
    • C(C4(C(C(C(N3(C(C2(=C(N(C1(C(C(C(O1)COP(OP(=O)([O-])OP(=O)([O-])O)(=O)[O-])O)O))C=N2)N=C3))=N))O4)O)O))OP([O-])([O-])=O
  • common name:
    • 1-(5-phospho-β-D-ribosyl)-ATP
  • inchi key:
    • InChIKey=RKNHJBVBFHDXGR-KEOHHSTQSA-I
  • molecular weight:
    • 714.24
  • Synonym(s):
    • 1-(5-phosphoribosyl)-ATP
    • N1-(5-phospho-D-ribosyl)-ATP
    • 5-phosphoribosyl-ATP
    • 1-(5-phospho-D-ribosyl)-ATP
    • phosphoribosyl-ATP

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • DRUGBANK : DB01661
  • PUBCHEM:
  • HMDB : HMDB03665
  • LIGAND-CPD:
  • CHEBI:
  • BIGG : prbatp
"C(C4(C(C(C(N3(C(C2(=C(N(C1(C(C(C(O1)COP(OP(=O)([O-])OP(=O)([O-])O)(=O)[O-])O)O))C=N2)N=C3))=N))O4)O)O))OP([O-])([O-])=O" cannot be used as a page name in this wiki.




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