Difference between revisions of "5.1.1.18-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.1.1.18-RXN 5.1.1.18-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.1.1.18-RXN 5.1.1.18-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.3.1 EC-3.5.3.1]
+
** [http://enzyme.expasy.org/EC/5.1.1.18 EC-5.1.1.18]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[ARG]][c] '''<=>''' 1 [[UREA]][c] '''+''' 1 [[L-ORNITHINE]][c]
+
** 1 [[SER]][c] '''=>''' 1 [[D-SERINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 L-arginine[c] '''<=>''' 1 urea[c] '''+''' 1 L-ornithine[c]
+
** 1 L-serine[c] '''=>''' 1 D-serine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_4415]]
+
* Gene: [[Tiso_gene_17207]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[orthology-creinhardtii]]
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
+
* [[PWY-6455]], vancomycin resistance II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6455 PWY-6455]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
+
* [[PWY-6196]], D-serine metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6196 PWY-6196]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
+
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
*** [[athaliana]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20569 20569]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10980 10980]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00551 R00551]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00589 R00589]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P05089 P05089]
+
{{#set: ec number=EC-5.1.1.18}}
−
** [http://www.uniprot.org/uniprot/P07824 P07824]
+
{{#set: gene associated=Tiso_gene_17207}}
−
** [http://www.uniprot.org/uniprot/P40906 P40906]
+
{{#set: in pathway=PWY-6455|PWY-6196}}
−
** [http://www.uniprot.org/uniprot/Q7M0Z3 Q7M0Z3]
+
−
** [http://www.uniprot.org/uniprot/P14012 P14012]
+
−
** [http://www.uniprot.org/uniprot/P37818 P37818]
+
−
** [http://www.uniprot.org/uniprot/P49900 P49900]
+
−
** [http://www.uniprot.org/uniprot/P39138 P39138]
+
−
** [http://www.uniprot.org/uniprot/P53608 P53608]
+
−
** [http://www.uniprot.org/uniprot/P72703 P72703]
+
−
** [http://www.uniprot.org/uniprot/O68051 O68051]
+
−
** [http://www.uniprot.org/uniprot/O49046 O49046]
+
−
** [http://www.uniprot.org/uniprot/O76895 O76895]
+
−
** [http://www.uniprot.org/uniprot/P33280 P33280]
+
−
** [http://www.uniprot.org/uniprot/Q10066 Q10066]
+
−
** [http://www.uniprot.org/uniprot/P00812 P00812]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-3.5.3.1}}
+
−
{{#set: gene associated=Tiso_gene_4415}}
+
−
{{#set: in pathway=ARGASEDEG-PWY|PWY-6922|ARG-PRO-PWY|ARG-GLU-PWY|PWY-4984|PWY-6305|CITRULBIO-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus|athaliana}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:16, 21 March 2018

Reaction 5.1.1.18-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-serine[c] => 1 D-serine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6455, vancomycin resistance II: PWY-6455
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6196, D-serine metabolism: PWY-6196
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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