Difference between revisions of "3.5.1.88-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_3081 == * left end position: ** 8600 * transcription direction: ** POSITIVE * right end position: ** 13266 * centisome position: ** 43.7169...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polypeptide_deformyla...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3081 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] ==
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* left end position:
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* direction:
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** 8600
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** polypeptide_deformylase
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* right end position:
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* ec number:
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** 13266
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** [http://enzyme.expasy.org/EC/3.5.1.88 EC-3.5.1.88]
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* centisome position:
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** 43.716957   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-15556]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[FORMYL-L-METHIONYL-PEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[METHIONYL-PEPTIDE]][c]
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***ec-number
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* With common name(s):
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** 1 a [protein] N-terminal-formyl-L-methionine[c] '''+''' 1 H2O[c] '''=>''' 1 formate[c] '''+''' 1 an N-terminal L-methionyl-[protein][c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7511]]
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* Gene: [[Tiso_gene_14998]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=8600}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05635 R05635]
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{{#set: right end position=13266}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=43.716957    }}
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{{#set: common name=polypeptide_deformylase}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: ec number=EC-3.5.1.88}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: gene associated=Tiso_gene_14998}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction 3.5.1.88-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polypeptide_deformylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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