Difference between revisions of "2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN] == * direction: ** LEF...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-dehydroquinate_synthase
+
** 4-methyl-2-oxopentanoate dehydrogenase (acylating)
−
** pentafunctional_protein
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.3.4 EC-4.2.3.4]
+
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''=>''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[ISOVALERYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-deoxy-D-arabino-heptulosonate 7-phosphate[c] '''=>''' 1 3-dehydroquinate[c] '''+''' 1 phosphate[c]
+
** 1 4-methyl-2-oxopentanoate[c] '''+''' 1 NAD+[c] '''+''' 1 coenzyme A[c] '''=>''' 1 CO2[c] '''+''' 1 NADH[c] '''+''' 1 isovaleryl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_3445]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_3974]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[synechocystis]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
−
* [[Tiso_gene_3447]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_5753]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_3446]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_5752]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6164]], 3-dehydroquinate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164]
+
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
−
*** [[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21968 21968]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25177 25177]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03083 R03083]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01651 R01651]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
+
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
+
−
** [http://www.uniprot.org/uniprot/Q9CES8 Q9CES8]
+
−
** [http://www.uniprot.org/uniprot/Q9PNT2 Q9PNT2]
+
−
** [http://www.uniprot.org/uniprot/P43879 P43879]
+
−
** [http://www.uniprot.org/uniprot/Q9JVW5 Q9JVW5]
+
−
** [http://www.uniprot.org/uniprot/P0A4Z4 P0A4Z4]
+
−
** [http://www.uniprot.org/uniprot/P07639 P07639]
+
−
** [http://www.uniprot.org/uniprot/Q9P7R0 Q9P7R0]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-dehydroquinate_synthase}}
+
{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (acylating)}}
−
{{#set: common name=pentafunctional_protein}}
+
{{#set: ec number=EC-1.2.1}}
−
{{#set: ec number=EC-4.2.3.4}}
+
{{#set: in pathway=LEU-DEG2-PWY}}
−
{{#set: gene associated=Tiso_gene_3445|Tiso_gene_3974|Tiso_gene_3447|Tiso_gene_5753|Tiso_gene_3446|Tiso_gene_5752}}
+
−
{{#set: in pathway=PWY-6164}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 19:33, 21 March 2018

Reaction 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-methyl-2-oxopentanoate dehydrogenase (acylating)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

Reconstruction information

External links




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