Difference between revisions of "P108-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-RXN CERAMIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P108-PWY P108-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-RXN CERAMIDASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P108-PWY P108-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
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** pyruvate fermentation to propanoate I
 
* Synonym(s):
 
* Synonym(s):
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** succinate-propionate fermentation pathway
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** pyruvate fermentation to propionate I
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** succinate-propanoate fermentation pathway
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''7''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[N-Acylsphingosine]][c] '''=>''' 1 [[Fatty-Acids]][c] '''+''' 1 [[SPHINGOSINE]][c]
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* [[FUMHYDR-RXN]]
* With common name(s):
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** 2 associated gene(s):
** 1 H2O[c] '''+''' 1 a sphingosine ceramide[c] '''=>''' 1 a fatty acid[c] '''+''' 1 sphingosine[c]
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*** [[Tiso_gene_3691]]
 
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*** [[Tiso_gene_6720]]
== Genes associated with this reaction  ==
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** 6 reconstruction source(s) associated:
Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
* [[Tiso_gene_14341]]
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*** [[orthology-esiliculosus]]
** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
== Pathways  ==
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*** [[orthology-athaliana]]
* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11470 PWY3DJ-11470]
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*** [[manual-primary_network]]
** '''3''' reactions found over '''5''' reactions in the full pathway
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*** [[orthology-creinhardtii]]
== Reconstruction information  ==
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* [[MALATE-DEH-RXN]]
* [[orthology]]:
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** 2 associated gene(s):
** [[pantograph]]:
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*** [[Tiso_gene_2323]]
*** [[esiliculosus]]
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*** [[Tiso_gene_1990]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[METHYLMALONYL-COA-MUT-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_9771]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.1.3.1-RXN 2.1.3.1-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-268 RXN0-268]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-2}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20856 20856]
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{{#set: common name=pyruvate fermentation to propanoate I}}
* LIGAND-RXN:
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{{#set: common name=succinate-propionate fermentation pathway|pyruvate fermentation to propionate I|succinate-propanoate fermentation pathway}}
** [http://www.genome.jp/dbget-bin/www_bget?R01493 R01493]
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{{#set: reaction found=3}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=7}}
{{#set: ec number=EC-3.5.1.23}}
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{{#set: completion rate=43.0}}
{{#set: gene associated=Tiso_gene_14341}}
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{{#set: in pathway=PWY3DJ-11470}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 19:16, 21 March 2018

Pathway P108-PWY

  • taxonomic range:
  • common name:
    • pyruvate fermentation to propanoate I
  • Synonym(s):
    • succinate-propionate fermentation pathway
    • pyruvate fermentation to propionate I
    • succinate-propanoate fermentation pathway

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links