Difference between revisions of "2.4.1.135-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-840 RXN1G-840] == * direction: ** LEFT-TO-RIGHT * common name: ** cis-delta17-3-oxo-C36:1-[ac...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.135-RXN 2.4.1.135-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: **...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-840 RXN1G-840] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.135-RXN 2.4.1.135-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** cis-delta17-3-oxo-C36:1-[acyl-carrier protein] synthase
+
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.M1 EC-2.3.1.M1]
+
** [http://enzyme.expasy.org/EC/2.4.1.135 EC-2.4.1.135]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[cis-delta15-gheddoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[cis-delta17-3-oxo-C36-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[Gal-Gal-Xyl-Proteins]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GlcA-Gal-Gal-Xyl-Proteins]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a cis-delta15-C34:1-[acp][c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a cis-delta17-3-oxo-C36:1-[acp][c] '''+''' 1 CO2[c]
+
** 1 a [protein]-3-O-(β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine[c] '''+''' 1 UDP-α-D-glucuronate[c] '''=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14485]]
+
* Gene: [[Tiso_gene_4139]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_19302]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15991]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
* [[PWY-6557]], glycosaminoglycan-protein linkage region biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6557 PWY-6557]
−
** '''86''' reactions found over '''182''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=cis-delta17-3-oxo-C36:1-[acyl-carrier protein] synthase}}
+
{{#set: common name=ORF}}
−
{{#set: ec number=EC-2.3.1.M1}}
+
{{#set: ec number=EC-2.4.1.135}}
−
{{#set: gene associated=Tiso_gene_14485|Tiso_gene_19302|Tiso_gene_15991}}
+
{{#set: gene associated=Tiso_gene_4139}}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: in pathway=PWY-6557}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:34, 21 March 2018

Reaction 2.4.1.135-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a [protein]-3-O-(β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine[c] + 1 UDP-α-D-glucuronate[c] => 1 UDP[c] + 1 H+[c] + 1 a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6557, glycosaminoglycan-protein linkage region biosynthesis: PWY-6557
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=2.4.1.135-RXN&oldid=42446"