Difference between revisions of "RXN-17788"

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(Created page with "Category:Gene == Gene Tiso_gene_10209 == * left end position: ** 966 * transcription direction: ** NEGATIVE * right end position: ** 3872 * centisome position: ** 11.09324...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17788 RXN-17788] == * direction: ** LEFT-TO-RIGHT * common name: ** Acyl-CoA dehydrogenase ** a...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_10209 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17788 RXN-17788] ==
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* left end position:
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* direction:
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** 966
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** Acyl-CoA dehydrogenase
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* right end position:
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** acyl-_dehydrogenase
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** 3872
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** acyl-CoA_dehydrogenase
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* centisome position:
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* ec number:
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** 11.093247   
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** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[2-KETO-ADIPATE-DEHYDROG-RXN]]
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* With identifiers:
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** [[pantograph]]-[[athaliana]]
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** 1 [[CPD-10269]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-19162]][c] '''+''' 1 [[ETF-Reduced]][c]
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* [[2OXOGLUTDECARB-RXN]]
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* With common name(s):
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** in-silico_annotation
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** 1 palmitoleoyl-CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''=>''' 1 (2E,9Z)-hexadecenoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
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***ec-number
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** experimental_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[AKGDHe2r]]
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* Gene: [[Tiso_gene_6475]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways associated ==
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-5652]]
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* Gene: [[Tiso_gene_5449]]
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* [[PWY-5084]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY66-425]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[LYSINE-DEG1-PWY]]
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* Gene: [[Tiso_gene_8272]]
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* [[PWY66-398]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_8271]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_16631]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_16113]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=966}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Acyl-CoA dehydrogenase}}
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{{#set: right end position=3872}}
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{{#set: common name=acyl-_dehydrogenase}}
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{{#set: centisome position=11.093247    }}
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{{#set: common name=acyl-CoA_dehydrogenase}}
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{{#set: reaction associated=2-KETO-ADIPATE-DEHYDROG-RXN|2OXOGLUTDECARB-RXN|AKGDHe2r}}
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{{#set: ec number=EC-1.3.8}}
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{{#set: pathway associated=PWY-5652|PWY-5084|PWY66-425|LYSINE-DEG1-PWY|PWY66-398}}
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{{#set: gene associated=Tiso_gene_6475|Tiso_gene_5449|Tiso_gene_8272|Tiso_gene_8271|Tiso_gene_16631|Tiso_gene_16113}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:34, 21 March 2018

Reaction RXN-17788

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acyl-CoA dehydrogenase
    • acyl-_dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 palmitoleoyl-CoA[c] + 1 an oxidized electron-transfer flavoprotein[c] + 1 H+[c] => 1 (2E,9Z)-hexadecenoyl-CoA[c] + 1 a reduced electron-transfer flavoprotein[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17788&oldid=42456"