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| − | [[Category:Reaction]] | + | [[Category:Pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=MGLDLCTANA-PWY MGLDLCTANA-PWY] == |
| − | * direction: | + | * taxonomic range: |
| − | ** LEFT-TO-RIGHT | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674] |
| | * common name: | | * common name: |
| − | ** ORF | + | ** methylglyoxal degradation VI |
| − | ** Pyruvate carboxylase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/6.4.1.1 EC-6.4.1.1]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) found == |
| − | * With identifiers:
| + | '''1''' reactions found over '''4''' reactions in the full pathway |
| − | ** 1 [[PYRUVATE]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c]
| + | * [[D-LACTALDEHYDE-DEHYDROGENASE-RXN]] |
| − | * With common name(s):
| + | ** 1 associated gene(s): |
| − | ** 1 pyruvate[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 oxaloacetate[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c]
| + | *** [[Tiso_gene_8488]] |
| − | | + | ** 1 reconstruction source(s) associated: |
| − | == Genes associated with this reaction ==
| + | *** [[orthology-creinhardtii]] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | == Reaction(s) not found == |
| − | * [[Tiso_gene_15145]] | + | * [http://metacyc.org/META/NEW-IMAGE?object=D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN] |
| − | ** IN-SILICO_ANNOTATION
| + | * [http://metacyc.org/META/NEW-IMAGE?object=LACTALDEHYDE-OXI-RXN LACTALDEHYDE-OXI-RXN] |
| − | ***AUTOMATED-NAME-MATCH
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-8641 RXN-8641] |
| − | * [[Tiso_gene_15144]]
| + | |
| − | ** IN-SILICO_ANNOTATION | + | |
| − | ***AUTOMATED-NAME-MATCH | + | |
| − | * [[Tiso_gene_2812]] | + | |
| − | ** IN-SILICO_ANNOTATION | + | |
| − | ***EC-NUMBER | + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | == Pathways == | + | |
| − | * [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142] | + | |
| − | ** '''8''' reactions found over '''14''' reactions in the full pathway
| + | |
| − | * [[PWY-6146]], Methanobacterium thermoautotrophicum biosynthetic metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146]
| + | |
| − | ** '''7''' reactions found over '''16''' reactions in the full pathway | + | |
| − | * [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY]
| + | |
| − | ** '''4''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PWY-5750]], itaconate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5750 PWY-5750]
| + | |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway | + | |
| − | * [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
| + | |
| − | ** '''10''' reactions found over '''12''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: taxonomic range=TAX-40674}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20844 20844]
| + | {{#set: common name=methylglyoxal degradation VI}} |
| − | * LIGAND-RXN:
| + | {{#set: reaction found=1}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00344 R00344]
| + | {{#set: total reaction=4}} |
| − | * UNIPROT:
| + | {{#set: completion rate=25.0}} |
| − | ** [http://www.uniprot.org/uniprot/Q05920 Q05920]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PNQ4 Q9PNQ4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P95127 P95127]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PP00 Q9PP00]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CHQ7 Q9CHQ7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9KWU4 Q9KWU4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P11498 P11498]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P52873 P52873]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P11154 P11154]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P32327 P32327]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O17732 O17732]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9UUE1 Q9UUE1]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q16921 Q16921]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9XBJ1 Q9XBJ1]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=ORF}} | + | |
| − | {{#set: common name=Pyruvate carboxylase}} | + | |
| − | {{#set: ec number=EC-6.4.1.1}} | + | |
| − | {{#set: gene associated=Tiso_gene_15145|Tiso_gene_15144|Tiso_gene_2812}} | + | |
| − | {{#set: in pathway=PWY-6142|PWY-6146|P42-PWY|PWY-5750|PWY66-399}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=esiliculosus}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
