Difference between revisions of "Tiso gene 17216"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
(Created page with "Category:Gene == Gene Tiso_gene_17216 == * right end position: ** 3672 * transcription direction: ** POSITIVE * left end position: ** 2433 * centisome position: ** 63.2934...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN] ==
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== Gene Tiso_gene_17216 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3672
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* common name:
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* transcription direction:
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** S-adenosyl-L-methionine:L-homocysteine S-methyltransferase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.1.1 EC-2.1.1]
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** 2433
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* centisome position:
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** 63.293446   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[6.3.4.10-RXN]]
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** 1 [[HOMO-CYS]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[6.3.4.11-RXN]]
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** 1 L-homocysteine[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 L-methionine[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[6.3.4.9-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[BIOTINLIG-RXN]]
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* [[Tiso_gene_5515]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[athaliana]]
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* Reaction: [[RXN-13039]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** Assignment: automated-name-match
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* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
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* Reaction: [[RXN-17127]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: automated-name-match
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* [[orthology]]:
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* Reaction: [[RXN-8654]]
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** [[pantograph]]:
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** Source: [[annotation-in-silico_annotation]]
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*** [[athaliana]]
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*** Assignment: automated-name-match
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*** [[esiliculosus]]
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* Reaction: [[RXN-8655]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-1141]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-5098]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6984]]
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* [[PWY0-1264]]
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* [[PWY0-522]]
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* [[PWY0-1275]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3672}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21820 21820]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=2433}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00650 R00650]
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{{#set: centisome position=63.293446    }}
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* UNIPROT:
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{{#set: reaction associated=6.3.4.10-RXN|6.3.4.11-RXN|6.3.4.9-RXN|BIOTINLIG-RXN|RXN-13039|RXN-17127|RXN-8654|RXN-8655|RXN0-1141|RXN0-5098}}
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** [http://www.uniprot.org/uniprot/Q9M1W4 Q9M1W4]
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{{#set: pathway associated=PWY-6984|PWY0-1264|PWY0-522|PWY0-1275}}
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** [http://www.uniprot.org/uniprot/Q9SDL7 Q9SDL7]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=S-adenosyl-L-methionine:L-homocysteine S-methyltransferase}}
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{{#set: ec number=EC-2.1.1}}
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{{#set: gene associated=Tiso_gene_5515}}
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{{#set: in pathway=PWY-702}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Latest revision as of 19:34, 21 March 2018

Gene Tiso_gene_17216

  • right end position:
    • 3672
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2433
  • centisome position:
    • 63.293446
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17216&oldid=42504"