Difference between revisions of "PWY-7654"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNPDEHYDROG-RXN MANNPDEHYDROG-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.e...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7088 TAX-70...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNPDEHYDROG-RXN MANNPDEHYDROG-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7088 TAX-7088]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/1.1.1.17 EC-1.1.1.17]
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** (8E,10E)-dodeca-8,10-dienol biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''11''' reactions in the full pathway
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** 1 [[MANNITOL-1P]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[FRUCTOSE-6P]][c]
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* [[2.3.1.155-RXN]]
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* With common name(s):
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** 0 associated gene:
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** 1 D-mannitol 1-phosphate[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 &beta;-D-fructofuranose 6-phosphate[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12507]]
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* [[Tiso_gene_15319]]
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** 1 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_5857]]
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== Pathways  ==
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** 5 reconstruction source(s) associated:
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* [[MANNIDEG-PWY]], mannitol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=MANNIDEG-PWY MANNIDEG-PWY]
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*** [[annotation-in-silico_annotation]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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*** [[orthology-athaliana]]
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* [[PWY-6531]], mannitol cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6531 PWY-6531]
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*** [[orthology-creinhardtii]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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*** [[annotation-experimental_annotation]]
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* [[orthology]]:
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* [[RXN-14131]]
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** [[pantograph]]:
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** 6 associated gene(s):
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*** [[esiliculosus]]
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*** [[Tiso_gene_883]]
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*** [[Tiso_gene_6475]]
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*** [[Tiso_gene_18566]]
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*** [[Tiso_gene_16631]]
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*** [[Tiso_gene_5991]]
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*** [[Tiso_gene_17967]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN-14268]]
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** 6 associated gene(s):
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*** [[Tiso_gene_10116]]
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*** [[Tiso_gene_3855]]
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*** [[Tiso_gene_16181]]
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*** [[Tiso_gene_15327]]
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*** [[Tiso_gene_17451]]
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*** [[Tiso_gene_3856]]
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** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-14271]]
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** 2 associated gene(s):
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*** [[Tiso_gene_5857]]
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*** [[Tiso_gene_14262]]
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** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-16540]]
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** 6 associated gene(s):
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*** [[Tiso_gene_6475]]
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*** [[Tiso_gene_5991]]
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*** [[Tiso_gene_16631]]
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*** [[Tiso_gene_18566]]
 +
*** [[Tiso_gene_883]]
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*** [[Tiso_gene_17967]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14272 RXN-14272]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14273 RXN-14273]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16541 RXN-16541]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16542 RXN-16542]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16543 RXN-16543]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-7088}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19661 19661]
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{{#set: common name=(8E,10E)-dodeca-8,10-dienol biosynthesis}}
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* LIGAND-RXN:
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{{#set: reaction found=6}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00758 R00758]
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{{#set: total reaction=11}}
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* UNIPROT:
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{{#set: completion rate=55.0}}
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** [http://www.uniprot.org/uniprot/P09424 P09424]
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** [http://www.uniprot.org/uniprot/P27543 P27543]
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** [http://www.uniprot.org/uniprot/Q02418 Q02418]
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** [http://www.uniprot.org/uniprot/P42957 P42957]
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** [http://www.uniprot.org/uniprot/P78008 P78008]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-1.1.1.17}}
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{{#set: gene associated=Tiso_gene_15319}}
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{{#set: in pathway=MANNIDEG-PWY|PWY-6531}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 19:35, 21 March 2018

Pathway PWY-7654

  • taxonomic range:
  • common name:
    • (8E,10E)-dodeca-8,10-dienol biosynthesis
  • Synonym(s):

Reaction(s) found

6 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7654&oldid=42570"