Difference between revisions of "Tiso gene 5934"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate_dehydrogenase_e1_c...")
(Created page with "Category:Gene == Gene Tiso_gene_5934 == * right end position: ** 4755 * transcription direction: ** NEGATIVE * left end position: ** 3568 * centisome position: ** 27.99529...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] ==
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== Gene Tiso_gene_5934 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4755
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* common name:
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* transcription direction:
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** pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial
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** NEGATIVE
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** dihydrolipoamide_acetyltransferase
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* left end position:
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** ORF
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** 3568
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.2.4.1 EC-1.2.4.1]
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** 27.99529   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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** 1 [[PYRUVATE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 pyruvate[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''=>''' 1 a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6983]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17539]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2693]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7519]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2515]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=4755}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01699 R01699]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: left end position=3568}}
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** [http://www.uniprot.org/uniprot/P06959 P06959]
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{{#set: centisome position=27.99529    }}
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** [http://www.uniprot.org/uniprot/P26267 P26267]
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P35485 P35485]
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** [http://www.uniprot.org/uniprot/Q59097 Q59097]
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** [http://www.uniprot.org/uniprot/Q9N1X8 Q9N1X8]
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** [http://www.uniprot.org/uniprot/P45119 P45119]
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** [http://www.uniprot.org/uniprot/P11966 P11966]
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** [http://www.uniprot.org/uniprot/P35488 P35488]
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** [http://www.uniprot.org/uniprot/P47515 P47515]
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** [http://www.uniprot.org/uniprot/P21882 P21882]
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** [http://www.uniprot.org/uniprot/P47516 P47516]
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** [http://www.uniprot.org/uniprot/P21881 P21881]
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** [http://www.uniprot.org/uniprot/P21873 P21873]
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** [http://www.uniprot.org/uniprot/P16387 P16387]
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** [http://www.uniprot.org/uniprot/P0AFG8 P0AFG8]
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** [http://www.uniprot.org/uniprot/P08559 P08559]
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** [http://www.uniprot.org/uniprot/P11177 P11177]
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** [http://www.uniprot.org/uniprot/P29803 P29803]
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** [http://www.uniprot.org/uniprot/P29804 P29804]
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** [http://www.uniprot.org/uniprot/P26284 P26284]
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** [http://www.uniprot.org/uniprot/Q9JU08 Q9JU08]
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** [http://www.uniprot.org/uniprot/Q9CJD6 Q9CJD6]
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** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
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** [http://www.uniprot.org/uniprot/Q9CJD5 Q9CJD5]
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** [http://www.uniprot.org/uniprot/Q09171 Q09171]
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** [http://www.uniprot.org/uniprot/P52901 P52901]
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** [http://www.uniprot.org/uniprot/P79931 P79931]
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** [http://www.uniprot.org/uniprot/P79932 P79932]
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** [http://www.uniprot.org/uniprot/Q9D051 Q9D051]
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** [http://www.uniprot.org/uniprot/P10801 P10801]
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** [http://www.uniprot.org/uniprot/P21874 P21874]
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** [http://www.uniprot.org/uniprot/P49432 P49432]
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** [http://www.uniprot.org/uniprot/Q59820 Q59820]
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** [http://www.uniprot.org/uniprot/P35486 P35486]
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** [http://www.uniprot.org/uniprot/P35487 P35487]
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** [http://www.uniprot.org/uniprot/Q06437 Q06437]
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** [http://www.uniprot.org/uniprot/P32473 P32473]
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** [http://www.uniprot.org/uniprot/Q59107 Q59107]
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** [http://www.uniprot.org/uniprot/P73405 P73405]
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** [http://www.uniprot.org/uniprot/Q49109 Q49109]
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** [http://www.uniprot.org/uniprot/O48685 O48685]
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** [http://www.uniprot.org/uniprot/P52902 P52902]
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** [http://www.uniprot.org/uniprot/P52904 P52904]
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** [http://www.uniprot.org/uniprot/P52903 P52903]
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** [http://www.uniprot.org/uniprot/O66112 O66112]
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** [http://www.uniprot.org/uniprot/Q9Y8I5 Q9Y8I5]
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** [http://www.uniprot.org/uniprot/Q9Y8I6 Q9Y8I6]
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** [http://www.uniprot.org/uniprot/O69478 O69478]
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** [http://www.uniprot.org/uniprot/P10802 P10802]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial}}
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{{#set: common name=dihydrolipoamide_acetyltransferase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.2.4.1}}
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{{#set: gene associated=Tiso_gene_6983|Tiso_gene_17539|Tiso_gene_2693|Tiso_gene_7519|Tiso_gene_2515}}
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{{#set: in pathway=PYRUVDEHYD-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:37, 21 March 2018

Gene Tiso_gene_5934

  • right end position:
    • 4755
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3568
  • centisome position:
    • 27.99529
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5934&oldid=42754"