Difference between revisions of "AMP"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.271-RXN 1.1.1.271-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GDP-L-fucose syntha...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMP AMP] == * smiles: ** C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP([O-])([O-])=O * commo...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.271-RXN 1.1.1.271-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMP AMP] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP([O-])([O-])=O
 
* common name:
 
* common name:
−
** GDP-L-fucose synthase
+
** AMP
−
* ec number:
+
* inchi key:
−
** [http://enzyme.expasy.org/EC/1.1.1.271 EC-1.1.1.271]
+
** InChIKey=UDMBCSSLTHHNCD-KQYNXXCUSA-L
 +
* molecular weight:
 +
** 345.208   
 
* Synonym(s):
 
* Synonym(s):
 +
** 5'-AMP
 +
** adenosine-monophosphate
 +
** adenylic acid
 +
** adenosine 5'-phosphate
 +
** adenosine 5'-monophosphate
 +
** adenylate
 +
** 5'-adenylic acid
 +
** 5'-adenosine monophosphate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[AMP-DEAMINASE-RXN]]
−
** 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-13118]][c]
+
* [[ADENYL-KIN-RXN]]
−
* With common name(s):
+
* [[RXN-14074]]
−
** 1 GDP-4-dehydro-α-D-rhamnose[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 GDP-β-L-fucose[c]
+
* [[AMP-DEPHOSPHORYLATION-RXN]]
−
 
+
* [[ATAMm]]
−
== Genes associated with this reaction  ==
+
* [[ATAMf]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[AMP5N]]
−
* [[Tiso_gene_16970]]
+
* [[ATAM]]
−
** EXPERIMENTAL_ANNOTATION
+
== Reaction(s) known to produce the compound ==
−
***AUTOMATED-NAME-MATCH
+
* [[ARGININE--TRNA-LIGASE-RXN]]
−
** [[pantograph]]-[[athaliana]]
+
* [[RXN66-483]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[RXN66-480]]
−
== Pathways  ==
+
* [[RXN0-7248]]
−
* [[PWY-66]], GDP-L-fucose biosynthesis I (from GDP-D-mannose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-66 PWY-66]
+
* [[RXN66-484]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[BIS5-ADENOSYL-TRIPHOSPHATASE-RXN]]
−
== Reconstruction information  ==
+
* [[GMP-SYN-GLUT-RXN]]
−
* [[orthology]]:
+
* [[RXN66-555]]
−
** [[pantograph]]:
+
* [[ACYLCOASYN-RXN]]
−
*** [[esiliculosus]]
+
* [[3.1.13.4-RXN]]
−
*** [[athaliana]]
+
* [[ACETATE--COA-LIGASE-RXN]]
−
* [[annotation]]:
+
* [[DIPHTINE--AMMONIA-LIGASE-RXN]]
−
** [[pathwaytools]]:
+
* [[ASPARTATE--TRNA-LIGASE-RXN]]
−
*** [[experimental_annotation]]
+
* [[RXN-14570]]
 +
* [[ASNSYNB-RXN]]
 +
* [[R5PDP]]
 +
* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
 +
* [[RXN-7904]]
 +
* [[RXN-16418]]
 +
* [[6.1.1.24-RXN]]
 +
* [[ASNSYNA-RXN]]
 +
* [[DNA-LIGASE-ATP-RXN]]
 +
* [[LYSINE--TRNA-LIGASE-RXN]]
 +
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 +
* [[RXN-15733]]
 +
* [[RXN-9386]]
 +
* [[APN]]
 +
* [[RXN-9623]]
 +
* [[4-COUMARATE--COA-LIGASE-RXN]]
 +
* [[RXN-8655]]
 +
* [[ASPARAGINE--TRNA-LIGASE-RXN]]
 +
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
 +
* [[6.3.4.10-RXN]]
 +
* [[ARGSUCCINSYN-RXN]]
 +
* [[RXN-2001]]
 +
* [[RXN0-1141]]
 +
* [[1.8.4.9-RXN]]
 +
* [[LNLNCACOAL]]
 +
* [[THREONINE--TRNA-LIGASE-RXN]]
 +
* [[AAL_fum]]
 +
* [[H2PTERIDINEPYROPHOSPHOKIN-RXN]]
 +
* [[METHIONINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-17919]]
 +
* [[6.2.1.34-RXN]]
 +
* [[RXN-12978]]
 +
* [[ALANINE--TRNA-LIGASE-RXN]]
 +
* [[RXN0-7238]]
 +
* [[RXN0-7239]]
 +
* [[RXN-13039]]
 +
* [[RXN-9644]]
 +
* [[PROLINE--TRNA-LIGASE-RXN]]
 +
* [[ADPSUGPPHOSPHAT-RXN]]
 +
* [[RXN-8348]]
 +
* [[VALINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-1126]]
 +
* [[PEPSYNTH-RXN]]
 +
* [[RXN-16165]]
 +
* [[RXN66-469]]
 +
* [[RXN-10919]]
 +
* [[RXN0-6524]]
 +
* [[RXN-10862]]
 +
* [[ADPA]]
 +
* [[RXN66-477]]
 +
* [[HISTIDINE--TRNA-LIGASE-RXN]]
 +
* [[RXN66-474]]
 +
* [[RXN-12184]]
 +
* [[RXN-13290]]
 +
* [[RNA-LIGASE-ATP-RXN]]
 +
* [[TYROSINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-16393]]
 +
* [[RXN-16389]]
 +
* [[R223-RXN]]
 +
* [[TRANS-RXN0-623]]
 +
* [[RXN0-5038]]
 +
* [[ADENOSINE-KINASE-RXN]]
 +
* [[ADENYLYLSULFATASE-RXN]]
 +
* [[TMDPT]]
 +
* [[RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48.]]
 +
* [[GTPPYPHOSKIN-RXN]]
 +
* [[GMP-SYN-NH3-RXN]]
 +
* [[RXN-16401]]
 +
* [[RXN-16402]]
 +
* [[GDPPYPHOSKIN-RXN]]
 +
* [[RXN0-1441]]
 +
* [[SERINE--TRNA-LIGASE-RXN]]
 +
* [[LINOLENOYL-RXN]]
 +
* [[PANTOATE-BETA-ALANINE-LIG-RXN]]
 +
* [[DNNH]]
 +
* [[RXN-17155]]
 +
* [[RXN-16380]]
 +
* [[RNA-3-PHOSPHATE-CYCLASE-RXN]]
 +
* [[THIAMIN-PYROPHOSPHOKINASE-RXN]]
 +
* [[RXN-9673]]
 +
* [[CYSTEINE--TRNA-LIGASE-RXN]]
 +
* [[6.3.4.11-RXN]]
 +
* [[LEUCINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-13614]]
 +
* [[GLYCINE--TRNA-LIGASE-RXN]]
 +
* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-10]]
 +
* [[RXN-10695]]
 +
* [[RXN0-5098]]
 +
* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
 +
* [[6.3.4.9-RXN]]
 +
* [[BIOTINLIG-RXN]]
 +
* [[RXN0-2161]]
 +
* [[RXN-17127]]
 +
* [[LNLCCOAL]]
 +
* [[APYRASE-RXN]]
 +
* [[GLURS-RXN]]
 +
* [[RXN-17927]]
 +
* [[2.7.9.3-RXN]]
 +
* [[ARDP]]
 +
* [[FACOAL18111Z]]
 +
* [[RXN0-2023]]
 +
* [[325-BISPHOSPHATE-NUCLEOTIDASE-RXN]]
 +
== Reaction(s) of unknown directionality ==
 +
* [[RPDPK]]
 +
* [[RXN-16415]]
 +
* [[PRPPSYN-RXN]]
 +
* [[AMPSYN-RXN]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* PUBCHEM:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18885 18885]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=15938965 15938965]
−
* LIGAND-RXN:
+
* CAS : 61-19-8
−
** [http://www.genome.jp/dbget-bin/www_bget?R05692 R05692]
+
* BIGG : amp
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* NCI:
−
{{#set: common name=GDP-L-fucose synthase}}
+
** [http://cactus.nci.nih.gov/ncidb2.2/?nsc=20264 20264]
−
{{#set: ec number=EC-1.1.1.271}}
+
* HMDB : HMDB00045
−
{{#set: gene associated=Tiso_gene_16970}}
+
* LIGAND-CPD:
−
{{#set: in pathway=PWY-66}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C00020 C00020]
−
{{#set: reconstruction category=orthology}}
+
* CHEMSPIDER:
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.chemspider.com/Chemical-Structure.10239183.html 10239183]
−
{{#set: reconstruction source=esiliculosus|athaliana}}
+
* CHEBI:
−
{{#set: reconstruction category=annotation}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=456215 456215]
−
{{#set: reconstruction tool=pathwaytools}}
+
* METABOLIGHTS : MTBLC456215
−
{{#set: reconstruction source=experimental_annotation}}
+
{{#set: smiles=C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP([O-])([O-])=O}}
 +
{{#set: common name=AMP}}
 +
{{#set: inchi key=InChIKey=UDMBCSSLTHHNCD-KQYNXXCUSA-L}}
 +
{{#set: molecular weight=345.208    }}
 +
{{#set: common name=5'-AMP|adenosine-monophosphate|adenylic acid|adenosine 5'-phosphate|adenosine 5'-monophosphate|adenylate|5'-adenylic acid|5'-adenosine monophosphate}}
 +
{{#set: consumed by=AMP-DEAMINASE-RXN|ADENYL-KIN-RXN|RXN-14074|AMP-DEPHOSPHORYLATION-RXN|ATAMm|ATAMf|AMP5N|ATAM}}
 +
{{#set: produced by=ARGININE--TRNA-LIGASE-RXN|RXN66-483|RXN66-480|RXN0-7248|RXN66-484|BIS5-ADENOSYL-TRIPHOSPHATASE-RXN|GMP-SYN-GLUT-RXN|RXN66-555|ACYLCOASYN-RXN|3.1.13.4-RXN|ACETATE--COA-LIGASE-RXN|DIPHTINE--AMMONIA-LIGASE-RXN|ASPARTATE--TRNA-LIGASE-RXN|RXN-14570|ASNSYNB-RXN|R5PDP|TRYPTOPHAN--TRNA-LIGASE-RXN|RXN-7904|RXN-16418|6.1.1.24-RXN|ASNSYNA-RXN|DNA-LIGASE-ATP-RXN|LYSINE--TRNA-LIGASE-RXN|UBIQUITIN--PROTEIN-LIGASE-RXN|RXN-15733|RXN-9386|APN|RXN-9623|4-COUMARATE--COA-LIGASE-RXN|RXN-8655|ASPARAGINE--TRNA-LIGASE-RXN|GLUTAMINE--TRNA-LIGASE-RXN|6.3.4.10-RXN|ARGSUCCINSYN-RXN|RXN-2001|RXN0-1141|1.8.4.9-RXN|LNLNCACOAL|THREONINE--TRNA-LIGASE-RXN|AAL_fum|H2PTERIDINEPYROPHOSPHOKIN-RXN|METHIONINE--TRNA-LIGASE-RXN|RXN-17919|6.2.1.34-RXN|RXN-12978|ALANINE--TRNA-LIGASE-RXN|RXN0-7238|RXN0-7239|RXN-13039|RXN-9644|PROLINE--TRNA-LIGASE-RXN|ADPSUGPPHOSPHAT-RXN|RXN-8348|VALINE--TRNA-LIGASE-RXN|RXN-1126|PEPSYNTH-RXN|RXN-16165|RXN66-469|RXN-10919|RXN0-6524|RXN-10862|ADPA|RXN66-477|HISTIDINE--TRNA-LIGASE-RXN|RXN66-474|RXN-12184|RXN-13290|RNA-LIGASE-ATP-RXN|TYROSINE--TRNA-LIGASE-RXN|RXN-16393|RXN-16389|R223-RXN|TRANS-RXN0-623|RXN0-5038|ADENOSINE-KINASE-RXN|ADENYLYLSULFATASE-RXN|TMDPT|RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48.|GTPPYPHOSKIN-RXN|GMP-SYN-NH3-RXN|RXN-16401|RXN-16402|GDPPYPHOSKIN-RXN|RXN0-1441|SERINE--TRNA-LIGASE-RXN|LINOLENOYL-RXN|PANTOATE-BETA-ALANINE-LIG-RXN|DNNH|RXN-17155|RXN-16380|RNA-3-PHOSPHATE-CYCLASE-RXN|THIAMIN-PYROPHOSPHOKINASE-RXN|RXN-9673|CYSTEINE--TRNA-LIGASE-RXN|6.3.4.11-RXN|LEUCINE--TRNA-LIGASE-RXN|RXN-13614|GLYCINE--TRNA-LIGASE-RXN|PHENYLALANINE--TRNA-LIGASE-RXN|RXN-10|RXN-10695|RXN0-5098|ISOLEUCINE--TRNA-LIGASE-RXN|6.3.4.9-RXN|BIOTINLIG-RXN|RXN0-2161|RXN-17127|LNLCCOAL|APYRASE-RXN|GLURS-RXN|RXN-17927|2.7.9.3-RXN|ARDP|FACOAL18111Z|RXN0-2023|325-BISPHOSPHATE-NUCLEOTIDASE-RXN}}
 +
{{#set: reversible reaction associated=RPDPK|RXN-16415|PRPPSYN-RXN|AMPSYN-RXN}}

Latest revision as of 19:38, 21 March 2018

Metabolite AMP

  • smiles:
    • C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP([O-])([O-])=O
  • common name:
    • AMP
  • inchi key:
    • InChIKey=UDMBCSSLTHHNCD-KQYNXXCUSA-L
  • molecular weight:
    • 345.208
  • Synonym(s):
    • 5'-AMP
    • adenosine-monophosphate
    • adenylic acid
    • adenosine 5'-phosphate
    • adenosine 5'-monophosphate
    • adenylate
    • 5'-adenylic acid
    • 5'-adenosine monophosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP([O-])([O-])=O" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=AMP&oldid=42901"