Difference between revisions of "THYM-PHOSPH-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17332 CPD-17332] == * smiles: ** CCC=CCC=CCC=CCC=CCC=CCCCCCC(=O)CC(SCCNC(=O)CCNC(=O)C(O)C(C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYM-PHOSPH-RXN THYM-PHOSPH-RXN] == * direction: ** REVERSIBLE * common name: ** thymidine_phosphor...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17332 CPD-17332] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYM-PHOSPH-RXN THYM-PHOSPH-RXN] ==
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* smiles:
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* direction:
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** CCC=CCC=CCC=CCC=CCC=CCCCCCC(=O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
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** REVERSIBLE
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* inchi key:
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** InChIKey=UQPANOGFYCZRAV-AFQBPCMKSA-J
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* common name:
 
* common name:
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** 3-oxo-tetracosapentaenoyl-CoA
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** thymidine_phosphorylase
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* molecular weight:
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* ec number:
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** 1118.034   
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** [http://enzyme.expasy.org/EC/2.4.2.2 EC-2.4.2.2]
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** [http://enzyme.expasy.org/EC/2.4.2.4 EC-2.4.2.4]
 
* Synonym(s):
 
* Synonym(s):
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** 3-oxo-(9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA
 
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** 3-oxo-all-cis-9,12,15,18,21-tetracosapentaenoyl-CoA
 
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** 3-oxo-(9Z,12Z,15Z,18Z,21Z)-tetracosa-9,12,15,18,21-pentaenoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-16129]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Pi]][c] '''+''' 1 [[THYMIDINE]][c] '''<=>''' 1 [[THYMINE]][c] '''+''' 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c]
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* [[RXN-16082]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 phosphate[c] '''+''' 1 thymidine[c] '''<=>''' 1 thymine[c] '''+''' 1 2-deoxy-&alpha;-D-ribose 1-phosphate[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_1011]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7181]], pyrimidine deoxyribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7181 PWY-7181]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71581129 71581129]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16037 16037]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=73871 73871]
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** [http://www.genome.jp/dbget-bin/www_bget?R01570 R01570]
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{{#set: smiles=CCC=CCC=CCC=CCC=CCC=CCCCCCC(=O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O}}
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* UNIPROT:
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{{#set: inchi key=InChIKey=UQPANOGFYCZRAV-AFQBPCMKSA-J}}
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** [http://www.uniprot.org/uniprot/P47717 P47717]
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{{#set: common name=3-oxo-tetracosapentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q58081 Q58081]
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{{#set: molecular weight=1118.034    }}
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** [http://www.uniprot.org/uniprot/P47297 P47297]
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{{#set: common name=3-oxo-(9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA|3-oxo-all-cis-9,12,15,18,21-tetracosapentaenoyl-CoA|3-oxo-(9Z,12Z,15Z,18Z,21Z)-tetracosa-9,12,15,18,21-pentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P19971 P19971]
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{{#set: consumed by=RXN-16129}}
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** [http://www.uniprot.org/uniprot/P19663 P19663]
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{{#set: produced by=RXN-16082}}
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** [http://www.uniprot.org/uniprot/P07650 P07650]
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** [http://www.uniprot.org/uniprot/P75052 P75052]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=thymidine_phosphorylase}}
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{{#set: ec number=EC-2.4.2.2}}
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{{#set: ec number=EC-2.4.2.4}}
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{{#set: gene associated=Tiso_gene_1011}}
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{{#set: in pathway=PWY-7181}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:39, 21 March 2018

Reaction THYM-PHOSPH-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • thymidine_phosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7181, pyrimidine deoxyribonucleosides degradation: PWY-7181
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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