Difference between revisions of "PWY-5743"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14117 RXN-14117] == * direction: ** REVERSIBLE * common name: ** pyruvate_kinase * ec number: *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14117 RXN-14117] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-200795]
 
* common name:
 
* common name:
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** pyruvate_kinase
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** 3-hydroxypropanoate cycle
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.40 EC-2.7.1.40]
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* Synonym(s):
 
* Synonym(s):
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** 3-hydroxypropionate/malyl-CoA cycle
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** 3-hydroxypropionate cycle
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''11''' reactions in the full pathway
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** 1 [[GTP]][c] '''+''' 1 [[PYRUVATE]][c] '''<=>''' 1 [[GDP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[PROTON]][c]
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 GTP[c] '''+''' 1 pyruvate[c] '''<=>''' 1 GDP[c] '''+''' 1 phosphoenolpyruvate[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_2812]]
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*** [[Tiso_gene_3800]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_5029]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_7965]]
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* [[Tiso_gene_14505]]
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** 5 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** [[orthology-athaliana]]
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* [[Tiso_gene_14504]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[manual-primary_network]]
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***EC-NUMBER
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_974]]
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* [[METHYLMALONYL-COA-MUT-RXN]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_9771]]
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** EXPERIMENTAL_ANNOTATION
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** 2 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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* [[Tiso_gene_18206]]
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** 1 associated gene(s):
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_5029]]
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
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== Pathways  ==
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* [[RXN-6383]]
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== Reconstruction information  ==
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** 3 associated gene(s):
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* [[orthology]]:
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*** [[Tiso_gene_5857]]
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** [[pantograph]]:
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*** [[Tiso_gene_16703]]
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*** [[creinhardtii]]
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*** [[Tiso_gene_14257]]
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*** [[esiliculosus]]
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** 3 reconstruction source(s) associated:
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* [[annotation]]:
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*** [[orthology-athaliana]]
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** [[pathwaytools]]:
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*** [[orthology-creinhardtii]]
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*** [[experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8963 RXN-8963]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8964 RXN-8964]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8974 RXN-8974]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9086 RXN-9086]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9087 RXN-9087]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-200795}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30298 30298]
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{{#set: common name=3-hydroxypropanoate cycle}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=3-hydroxypropionate/malyl-CoA cycle|3-hydroxypropionate cycle}}
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{{#set: common name=pyruvate_kinase}}
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{{#set: reaction found=4}}
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{{#set: ec number=EC-2.7.1.40}}
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{{#set: total reaction=11}}
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{{#set: gene associated=Tiso_gene_14505|Tiso_gene_14504|Tiso_gene_974|Tiso_gene_18206}}
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{{#set: completion rate=36.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:40, 21 March 2018

Pathway PWY-5743

  • taxonomic range:
  • common name:
    • 3-hydroxypropanoate cycle
  • Synonym(s):
    • 3-hydroxypropionate/malyl-CoA cycle
    • 3-hydroxypropionate cycle

Reaction(s) found

4 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5743&oldid=43091"