Difference between revisions of "Tiso gene 14060"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11856 RXN-11856] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA (cytosine(34)-C(5))-me...")
(Created page with "Category:Gene == Gene Tiso_gene_14060 == * right end position: ** 4533 * transcription direction: ** NEGATIVE * left end position: ** 1681 * centisome position: ** 28.6273...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11856 RXN-11856] ==
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== Gene Tiso_gene_14060 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4533
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* common name:
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* transcription direction:
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** tRNA (cytosine(34)-C(5))-methyltransferase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.1.1.203 EC-2.1.1.203]
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** 1681
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** [http://enzyme.expasy.org/EC/2.1.1.202 EC-2.1.1.202]
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* centisome position:
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** 28.627384   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[MYRISTOYLACYLTRAN-RXN]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Cytosine-34-tRNA-Precursors]][c] '''=>''' 1 [[5-METHYLCYTOSINE-34-TRNA-PRECURSORS]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytosine34 in tRNA precursor[c] '''=>''' 1 a 5 methylcytosine34 in tRNA precursor[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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== Pathways associated ==
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* [[KDO-NAGLIPASYN-PWY]]
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== Genes associated with this reaction  ==
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* [[KDO-LIPASYN-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3065]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-6829]], tRNA methylation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829]
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** '''3''' reactions found over '''15''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4533}}
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{{#set: common name=tRNA (cytosine(34)-C(5))-methyltransferase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-2.1.1.203}}
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{{#set: left end position=1681}}
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{{#set: ec number=EC-2.1.1.202}}
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{{#set: centisome position=28.627384    }}
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{{#set: gene associated=Tiso_gene_3065}}
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{{#set: reaction associated=MYRISTOYLACYLTRAN-RXN}}
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{{#set: in pathway=PWY-6829}}
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{{#set: pathway associated=KDO-NAGLIPASYN-PWY|KDO-LIPASYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Latest revision as of 19:40, 21 March 2018

Gene Tiso_gene_14060

  • right end position:
    • 4533
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1681
  • centisome position:
    • 28.627384
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14060&oldid=43128"