Difference between revisions of "RXN-11856"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_804 == * left end position: ** 5276 * transcription direction: ** NEGATIVE * right end position: ** 9665 * centisome position: ** 18.42243...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11856 RXN-11856] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA (cytosine(34)-C(5))-me...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11856 RXN-11856] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** tRNA (cytosine(34)-C(5))-methyltransferase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.1.1.203 EC-2.1.1.203] |
| − | + | ** [http://enzyme.expasy.org/EC/2.1.1.202 EC-2.1.1.202] | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** in- | + | ** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Cytosine-34-tRNA-Precursors]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[5-METHYLCYTOSINE-34-TRNA-PRECURSORS]][c] |
| − | *** | + | * With common name(s): |
| − | == Pathways | + | ** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytosine34 in tRNA precursor[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 a 5 methylcytosine34 in tRNA precursor[c] |
| − | * [[ | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_3065]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-6829]], tRNA methylation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829] | ||
| + | ** '''3''' reactions found over '''15''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=tRNA (cytosine(34)-C(5))-methyltransferase}} |
| − | {{#set: | + | {{#set: ec number=EC-2.1.1.203}} |
| − | {{#set: | + | {{#set: ec number=EC-2.1.1.202}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_3065}} |
| − | {{#set: pathway | + | {{#set: in pathway=PWY-6829}} |
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-experimental_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:40, 21 March 2018
Contents
Reaction RXN-11856
- direction:
- LEFT-TO-RIGHT
- common name:
- tRNA (cytosine(34)-C(5))-methyltransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 S-ADENOSYLMETHIONINE[c] + 1 Cytosine-34-tRNA-Precursors[c] => 1 ADENOSYL-HOMO-CYS[c] + 1 PROTON[c] + 1 5-METHYLCYTOSINE-34-TRNA-PRECURSORS[c]
- With common name(s):
- 1 S-adenosyl-L-methionine[c] + 1 a cytosine34 in tRNA precursor[c] => 1 S-adenosyl-L-homocysteine[c] + 1 H+[c] + 1 a 5 methylcytosine34 in tRNA precursor[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_3065
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
Pathways
- PWY-6829, tRNA methylation (yeast): PWY-6829
- 3 reactions found over 15 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
