Difference between revisions of "RXN-15013"

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(Created page with "Category:Gene == Gene Tiso_gene_2588 == * left end position: ** 520 * transcription direction: ** POSITIVE * right end position: ** 4731 * centisome position: ** 2.766546...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15013 RXN-15013] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ide...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_2588 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15013 RXN-15013] ==
* left end position:
+
* direction:
** 520
+
** REVERSIBLE
* transcription direction:
+
** POSITIVE
+
* right end position:
+
** 4731
+
* centisome position:
+
** 2.766546   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[3.2.1.84-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[CPD-15900]][c] '''<=>''' 1 [[3-HYDROXYPIMELYL-COA]][c] '''+''' 1 [[PROTON]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 H2O[c] '''+''' 1 2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA[c] '''<=>''' 1 3-hydroxypimeloyl-CoA[c] '''+''' 1 H+[c]
***ec-number
+
 
** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
* [[ALPHAGALACTOSID-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
** [[pantograph]]-[[athaliana]]
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* Gene: [[Tiso_gene_7477]]
* [[RXN-15910]]
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** Source: [[orthology-athaliana]]
** [[pantograph]]-[[athaliana]]
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== Pathways  ==
** [[pantograph]]-[[athaliana]]
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* [[CENTBENZCOA-PWY]], benzoyl-CoA degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=CENTBENZCOA-PWY CENTBENZCOA-PWY]
* [[RXN-2141]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
** [[pantograph]]-[[esiliculosus]]
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* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
== Pathways associated ==
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** '''5''' reactions found over '''17''' reactions in the full pathway
* [[PWY-842]]
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== Reconstruction information  ==
* [[PWY0-1301]]
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* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=520}}
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{{#set: direction=REVERSIBLE}}
{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Tiso_gene_7477}}
{{#set: right end position=4731}}
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{{#set: in pathway=CENTBENZCOA-PWY|PWY-7401}}
{{#set: centisome position=2.766546    }}
+
{{#set: reconstruction category=orthology}}
{{#set: reaction associated=3.2.1.84-RXN|ALPHAGALACTOSID-RXN|RXN-15910|RXN-2141}}
+
{{#set: reconstruction source=orthology-athaliana}}
{{#set: pathway associated=PWY-842|PWY0-1301}}
+
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:41, 21 March 2018

Reaction RXN-15013

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA[c] <=> 1 3-hydroxypimeloyl-CoA[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CENTBENZCOA-PWY, benzoyl-CoA degradation II (anaerobic): CENTBENZCOA-PWY
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate): PWY-7401
    • 5 reactions found over 17 reactions in the full pathway

Reconstruction information

External links