Difference between revisions of "PWY-7606"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16095 RXN-16095] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16095 RXN-16095] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** chloroplast_beta-keto_acyl_reductase
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** docosahexaenoate biosynthesis III (6-desaturase, mammals)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''14''' reactions found over '''14''' reactions in the full pathway
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** 1 [[NADPH]][c] '''+''' 1 [[CPD-17346]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-17347]][c] '''+''' 1 [[NADP]][c]
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* [[RXN-13442]]
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* With common name(s):
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** 0 associated gene:
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** 1 NADPH[c] '''+''' 1 3-oxo-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 (3R)-hydroxy-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c] '''+''' 1 NADP+[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-13443]]
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* [[Tiso_gene_9871]]
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** 3 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_9871]]
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***EC-NUMBER
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*** [[Tiso_gene_13083]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_9885]]
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***EC-NUMBER
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** 3 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-experimental_annotation]]
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* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7601 PWY-7601]
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*** [[annotation-in-silico_annotation]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7725 PWY-7725]
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* [[RXN-13444]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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** 0 associated gene:
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* [[PWY-6598]], sciadonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598]
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** 2 reconstruction source(s) associated:
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** '''4''' reactions found over '''5''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** [[annotation-experimental_annotation]]
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* [[annotation]]:
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* [[RXN-13445]]
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** [[pathwaytools]]:
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** 0 associated gene:
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*** [[experimental_annotation]]
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** 2 reconstruction source(s) associated:
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*** [[in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-16082]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN-16103]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN-16129]]
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** 1 associated gene(s):
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*** [[Tiso_gene_9871]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-16130]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-16131]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-16132]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN-16134]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18566]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN-16135]]
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** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN-16136]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-16137]]
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** 5 associated gene(s):
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*** [[Tiso_gene_17451]]
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*** [[Tiso_gene_15327]]
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*** [[Tiso_gene_3856]]
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*** [[Tiso_gene_10116]]
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*** [[Tiso_gene_3855]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33208}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: common name=docosahexaenoate biosynthesis III (6-desaturase, mammals)}}
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{{#set: gene associated=Tiso_gene_9871}}
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{{#set: reaction found=14}}
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{{#set: in pathway=PWY-7601|PWY-7725|PWY-6598}}
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{{#set: total reaction=14}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:41, 21 March 2018

Pathway PWY-7606

  • taxonomic range:
  • common name:
    • docosahexaenoate biosynthesis III (6-desaturase, mammals)
  • Synonym(s):

Reaction(s) found

14 reactions found over 14 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7606&oldid=43260"