Difference between revisions of "RXN-646"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17793 RXN-17793] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_mito...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3.5....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17793 RXN-17793] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** hydroxyacyl-coenzyme_a_mitochondrial
 
−
** 3-hydroxyacyl-_dehydrogenase
 
−
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
+
** [http://enzyme.expasy.org/EC/3.5.1.107 EC-3.5.1.107]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-19161]][c] '''=>''' 1 [[CPD-19154]][c]
+
** 1 [[MALEAMATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MALEATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 (2E,7Z)-tetradecenoyl-CoA[c] '''=>''' 1 (S)-3-hydroxy-(7Z)-tetradecenoyl-CoA[c]
+
** 1 maleamate[c] '''+''' 1 H2O[c] '''=>''' 1 maleate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18839]]
+
* Gene: [[Tiso_gene_14341]]
−
** IN-SILICO_ANNOTATION
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** Source: [[orthology-athaliana]]
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***EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* [[Tiso_gene_18838]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14262]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14026]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5857]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-722]], nicotinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-722 PWY-722]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5033]], nicotinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5033 PWY-5033]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7128]], nicotine degradation III (VPP pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7128 PWY-7128]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27385 27385]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03540 R03540]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
+
{{#set: ec number=EC-3.5.1.107}}
−
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
+
{{#set: gene associated=Tiso_gene_14341}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
+
{{#set: in pathway=PWY-6993|PWY-722|PWY-5033|PWY-7128}}
−
{{#set: ec number=EC-1.1.1.35}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: gene associated=Tiso_gene_18839|Tiso_gene_18838|Tiso_gene_14262|Tiso_gene_14026|Tiso_gene_5857}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 19:17, 21 March 2018

Reaction RXN-646

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 maleamate[c] + 1 H2O[c] => 1 maleate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6993, nicotine degradation II (pyrrolidine pathway): PWY-6993
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-722, nicotinate degradation I: PWY-722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5033, nicotinate degradation II: PWY-5033
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7128, nicotine degradation III (VPP pathway): PWY-7128
    • 1 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-646&oldid=40630"