Difference between revisions of "RXN-12747"

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(Created page with "Category:Gene == Gene Tiso_gene_16631 == * left end position: ** 355 * transcription direction: ** POSITIVE * right end position: ** 2444 * centisome position: ** 8.384506...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12747 RXN-12747] == * direction: ** LEFT-TO-RIGHT * common name: ** 5-hydroxy-3-[(3aS,4S,5R,7aS...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_16631 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12747 RXN-12747] ==
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* left end position:
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* direction:
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** 355
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA 5-dehydrogenase
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* right end position:
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** 3-beta_hydroxysteroid_dehydrogenase_isomerase
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** 2444
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** ORF
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* centisome position:
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* ec number:
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** 8.384506   
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** [http://enzyme.expasy.org/EC/1.1.1.145 EC-1.1.1.145]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACYLCOADEHYDROG-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-13754]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-13755]][c]
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***automated-name-match
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* With common name(s):
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* [[LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN]]
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** 1 H+[c] '''+''' 1 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-11734]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* Gene: [[Tiso_gene_18774]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-13451]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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* Gene: [[Tiso_gene_897]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-13615]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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** Source: [[orthology-esiliculosus]]
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***ec-number
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* Gene: [[Tiso_gene_11016]]
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* [[RXN-14131]]
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** Source: [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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* Gene: [[Tiso_gene_2957]]
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* [[RXN-14229]]
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** Source: [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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== Pathways  ==
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* [[RXN-14262]]
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* [[PWY-6944]], androstenedione degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6944 PWY-6944]
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** in-silico_annotation
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** '''2''' reactions found over '''15''' reactions in the full pathway
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***ec-number
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== Reconstruction information  ==
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* [[RXN-14278]]
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* Category: [[orthology]]
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** in-silico_annotation
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** Source: [[orthology-esiliculosus]]
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***ec-number
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*** Tool: [[pantograph]]
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* [[RXN-16540]]
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* Category: [[annotation]]
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** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Tool: [[pathwaytools]]
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* [[RXN-16557]]
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** in-silico_annotation
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***ec-number
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* [[RXN-17775]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17779]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17783]]
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** in-silico_annotation
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−
***automated-name-match
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* [[RXN-17784]]
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** in-silico_annotation
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−
***automated-name-match
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* [[RXN-17788]]
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−
** in-silico_annotation
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−
***automated-name-match
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* [[RXN-17792]]
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** in-silico_annotation
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−
***automated-name-match
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* [[RXN-17796]]
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** in-silico_annotation
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−
***automated-name-match
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−
== Pathways associated ==
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[FAO-PWY]]
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* [[PWY-7656]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=355}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA 5-dehydrogenase}}
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{{#set: right end position=2444}}
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{{#set: common name=3-beta_hydroxysteroid_dehydrogenase_isomerase}}
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{{#set: centisome position=8.384506    }}
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{{#set: common name=ORF}}
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{{#set: reaction associated=ACYLCOADEHYDROG-RXN|LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN|RXN-11734|RXN-13451|RXN-13615|RXN-14131|RXN-14229|RXN-14262|RXN-14278|RXN-16540|RXN-16557|RXN-17775|RXN-17779|RXN-17783|RXN-17784|RXN-17788|RXN-17792|RXN-17796}}
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{{#set: ec number=EC-1.1.1.145}}
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{{#set: pathway associated=PWY-7094|PWY-7654|FAO-PWY|PWY-7656}}
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{{#set: gene associated=Tiso_gene_18774|Tiso_gene_897|Tiso_gene_11016|Tiso_gene_2957}}
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{{#set: in pathway=PWY-6944}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:43, 21 March 2018

Reaction RXN-12747

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA 5-dehydrogenase
    • 3-beta_hydroxysteroid_dehydrogenase_isomerase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA[c] + 1 NADPH[c] => 1 NADP+[c] + 1 5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6944, androstenedione degradation: PWY-6944
    • 2 reactions found over 15 reactions in the full pathway

Reconstruction information

External links

"5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA 5-dehydrogenase" cannot be used as a page name in this wiki.





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