Difference between revisions of "RXN-12729"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_3526 == * left end position: ** 6499 * transcription direction: ** POSITIVE * right end position: ** 8377 * centisome position: ** 39.38072...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12729 RXN-12729] == * direction: ** LEFT-TO-RIGHT * common name: ** cystathione_gamma * ec numb...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12729 RXN-12729] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** cystathione_gamma |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/4.4.1.8 EC-4.4.1.8] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | * | + | ** 1 [[CPD-13717]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[SELENOHOMOCYSTEINE]][c] |
| − | ** | + | * With common name(s): |
| − | + | ** 1 L-selenocystathionine[c] '''+''' 1 H2O[c] '''=>''' 1 pyruvate[c] '''+''' 1 ammonium[c] '''+''' 1 seleno-L-homocysteine[c] | |
| − | + | ||
| − | == | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[ | + | * Gene: [[Tiso_gene_3732]] |
| − | * [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | * [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | * [[ | + | ** Source: [[orthology-creinhardtii]] |
| − | * [[ | + | ** Source: [[orthology-creinhardtii]] |
| − | * [[ | + | == Pathways == |
| − | * [[ | + | * [[PWY-6936]], seleno-amino acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936] |
| − | * [[ | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
| − | * [[ | + | == Reconstruction information == |
| − | * [[ | + | * Category: [[orthology]] |
| − | * [[ | + | ** Source: [[orthology-creinhardtii]] |
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=cystathione_gamma}} |
| − | {{#set: | + | {{#set: ec number=EC-4.4.1.8}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_3732}} |
| − | {{#set: | + | {{#set: in pathway=PWY-6936}} |
| − | {{#set: | + | {{#set: reconstruction category=orthology|annotation}} |
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii|annotation-experimental_annotation}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:44, 21 March 2018
Contents
Reaction RXN-12729
- direction:
- LEFT-TO-RIGHT
- common name:
- cystathione_gamma
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-13717[c] + 1 WATER[c] => 1 PYRUVATE[c] + 1 AMMONIUM[c] + 1 SELENOHOMOCYSTEINE[c]
- With common name(s):
- 1 L-selenocystathionine[c] + 1 H2O[c] => 1 pyruvate[c] + 1 ammonium[c] + 1 seleno-L-homocysteine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_3732
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-creinhardtii
- Source: orthology-creinhardtii
- Source: annotation-in-silico_annotation
Pathways
- PWY-6936, seleno-amino acid biosynthesis: PWY-6936
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-creinhardtii
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
