Difference between revisions of "PWY-7400"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12959 RXN-12959] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12959 RXN-12959] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
** [http://enzyme.expasy.org/EC/2.7.1.174 EC-2.7.1.174]
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* common name:
 +
** L-arginine biosynthesis IV (archaebacteria)
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''7''' reactions found over '''9''' reactions in the full pathway
** 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[CDP]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c]
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* [[ARGSUCCINLYA-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 CTP[c] '''=>''' 1 CDP[c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_2485]]
 
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** 7 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
== Pathways  ==
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*** [[orthology-esiliculosus]]
* [[TRIGLSYN-PWY]], diacylglycerol and triacylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRIGLSYN-PWY TRIGLSYN-PWY]
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*** [[annotation-in-silico_annotation]]
** '''7''' reactions found over '''7''' reactions in the full pathway
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*** [[orthology-athaliana]]
== Reconstruction information  ==
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*** [[orthology-synechocystis]]
* [[annotation]]:
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*** [[manual-primary_network]]
** [[pathwaytools]]:
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*** [[orthology-creinhardtii]]
*** [[in-silico_annotation]]
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* [[ARGSUCCINSYN-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_12592]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[CARBPSYN-RXN]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_4976]]
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*** [[Tiso_gene_4975]]
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*** [[Tiso_gene_4685]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[ORNCARBAMTRANSFER-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_18444]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
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* [[RXN-15005]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_13144]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-15006]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_6700]]
 +
*** [[Tiso_gene_8102]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-15007]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_11231]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15003 RXN-15003]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15004 RXN-15004]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-2157}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25951 25951]
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{{#set: taxonomic range=TAX-2}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=L-arginine biosynthesis IV (archaebacteria)}}
{{#set: ec number=EC-2.7.1.174}}
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{{#set: reaction found=7}}
{{#set: in pathway=TRIGLSYN-PWY}}
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{{#set: total reaction=9}}
{{#set: reconstruction category=annotation}}
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{{#set: completion rate=78.0}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:17, 21 March 2018

Pathway PWY-7400

  • taxonomic range:
  • common name:
    • L-arginine biosynthesis IV (archaebacteria)
  • Synonym(s):

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links